MOLECULAR-CLONING OF THE COMMON CARP (CYPRINUS-CARPIO) RHODOPSIN CDNA

被引:10
作者
TSAI, HJ [1 ]
SHIH, SR [1 ]
KUO, CM [1 ]
LI, LK [1 ]
机构
[1] COLUMBIA UNIV,DEPT OPHTHALMOL RES HLTH SCI,NEW YORK,NY
来源
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY | 1994年 / 109卷 / 01期
关键词
CARP; PCR SCREENING; PHOTORECEPTOR; RETINAL CDNA LIBRARY; RHODOPSIN; SIGNAL TRANSDUCTION; TRANSMEMBRANE DOMAIN; VISUAL PIGMENT;
D O I
10.1016/0305-0491(94)90144-9
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A recombinant phage clone containing a 1584 nucleotides rhodopsin cDNA was screened from a carp retinal cDNA library. The inserted DNA consisting of a single open reading frame of 1062 nucleotides at positions 72 and 1133 encodes a 354 amino acid polypeptide. The deduced amino acid sequence of carp rhodopsin showed 95.7, 85.5 and 74.4% identity with that of goldfish, sand goby and lamprey, respectively. The sites of palmitoylation, glycosylation, disulfide bond formation and Schiff base formation in the putative rhodopsin are all conserved.
引用
收藏
页码:81 / 88
页数:8
相关论文
共 25 条
[1]  
ALUBAIDI MR, 1990, J BIOL CHEM, V265, P20563
[2]   ROD OPSIN CDNA SEQUENCE FROM THE SAND GOBY (POMATOSCHISTUS-MINUTUS) COMPARED WITH THOSE OF OTHER VERTEBRATES [J].
ARCHER, SN ;
LYTHGOE, JN ;
HALL, L .
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 1992, 248 (1321) :19-25
[3]  
CHOMCZYNSKI P, 1987, ANAL BIOCHEM, V162, P156, DOI 10.1016/0003-2697(87)90021-2
[4]   A TECHNIQUE FOR RADIOLABELING DNA RESTRICTION ENDONUCLEASE FRAGMENTS TO HIGH SPECIFIC ACTIVITY [J].
FEINBERG, AP ;
VOGELSTEIN, B .
ANALYTICAL BIOCHEMISTRY, 1983, 132 (01) :6-13
[5]   TOTAL SYNTHESIS OF A GENE FOR BOVINE RHODOPSIN [J].
FERRETTI, L ;
KARNIK, SS ;
KHORANA, HG ;
NASSAL, M ;
OPRIAN, DD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1986, 83 (03) :599-603
[6]  
Hanahan D., 1985, DNA CLONING PRACTICA, P109
[7]   CLUSTAL - A PACKAGE FOR PERFORMING MULTIPLE SEQUENCE ALIGNMENT ON A MICROCOMPUTER [J].
HIGGINS, DG ;
SHARP, PM .
GENE, 1988, 73 (01) :237-244
[8]   ISOLATION AND CHARACTERIZATION OF LAMPREY RHODOPSIN CDNA [J].
HISATOMI, O ;
IWASA, T ;
TOKUNAGA, F ;
YASUI, A .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1991, 174 (03) :1125-1132
[9]   CLONING AND EXPRESSION OF GOLDFISH OPSIN SEQUENCES [J].
JOHNSON, RL ;
GRANT, KB ;
ZANKEL, TC ;
BOEHM, MF ;
MERBS, SL ;
NATHANS, J ;
NAKANISHI, K .
BIOCHEMISTRY, 1993, 32 (01) :208-214
[10]  
KHORANA HG, 1992, J BIOL CHEM, V26, P1