A HIGH-RESOLUTION PHYSICAL MAP OF 2.5-MBP OF THE DOWN-SYNDROME REGION ON CHROMOSOME-21

被引:34
作者
PATIL, N
PETERSON, A
ROTHMAN, A
DEJONG, PJ
MYERS, RM
COX, DR
机构
[1] STANFORD UNIV, SCH MED, DEPT GENET, STANFORD, CA 94305 USA
[2] UNIV CALIF SAN FRANCISCO, DEPT PHYSIOL, SAN FRANCISCO, CA 94143 USA
[3] LAWRENCE LIVERMORE NATL LAB, DIV BIOMED SCI, LIVERMORE, CA 94550 USA
基金
美国国家卫生研究院;
关键词
D O I
10.1093/hmg/3.10.1811
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The region surrounding D21S55 in band 21q22 of human chromosome 21 has been implicated in the etiology of Down syndrome (DS). In this paper, we report the construction of a high resolution map of a 2.5 Mb region around the marker D21S55. Characterization of YAC clones by accurate size determination, end isolation and marker assignment was used to build a refined YAC-based map. The YAC clones were then used to isolate 284 cosmid clones, covering 2.3 Mb, from a chromosome 21-specific cosmid library. The cosmid clones were ordered into overlapping groups and a restriction map of each group was determined. The groups of cosmids were then ordered and oriented with respect to the YAC-based map. This high resolution map provides the framework for further analysis of the region by transcribed sequence mapping and sequence determination.
引用
收藏
页码:1811 / 1817
页数:7
相关论文
共 21 条
[1]   A COSMID CONTIG AND HIGH-RESOLUTION RESTRICTION MAP OF THE 2 MEGABASE REGION CONTAINING THE HUNTINGTONS-DISEASE GENE [J].
BAXENDALE, S ;
MACDONALD, ME ;
MOTT, R ;
FRANCIS, F ;
LIN, C ;
KIRBY, SF ;
JAMES, M ;
ZEHETNER, G ;
HUMMERICH, H ;
VALDES, J ;
COLLINS, FS ;
DEAVEN, LJ ;
GUSELLA, JF ;
LEHRACH, H ;
BATES, GP .
NATURE GENETICS, 1993, 4 (02) :181-&
[2]   GENERATION OF A NESTED SERIES OF INTERSTITIAL DELETIONS IN YEAST ARTIFICIAL CHROMOSOMES CARRYING HUMAN DNA [J].
CAMPBELL, C ;
GULATI, R ;
NANDI, AK ;
FLOY, K ;
HIETER, P ;
KUCHERLAPATI, RS .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1991, 88 (13) :5744-5748
[3]   ORDERED SHOTGUN SEQUENCING, A STRATEGY FOR INTEGRATED MAPPING AND SEQUENCING OF YAC CLONES [J].
CHEN, EY ;
SCHLESSINGER, D ;
KERE, J .
GENOMICS, 1993, 17 (03) :651-656
[4]   EFFECTIVE AMPLIFICATION OF LONG TARGETS FROM CLONED INSERTS AND HUMAN GENOMIC DNA [J].
CHENG, S ;
FOCKLER, C ;
BARNES, WM ;
HIGUCHI, R .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (12) :5695-5699
[5]   CONTINUUM OF OVERLAPPING CLONES SPANNING THE ENTIRE HUMAN CHROMOSOME-21Q [J].
CHUMAKOV, I ;
RIGAULT, P ;
GUILLOU, S ;
OUGEN, P ;
BILLAUT, A ;
GUASCONI, G ;
GERVY, P ;
LEGALL, I ;
SOULARUE, P ;
GRINAS, L ;
BOUGUELERET, L ;
BELLANNECHANTELOT, C ;
LACROIX, B ;
BARILLOT, E ;
GESNOUIN, P ;
POOK, S ;
VAYSSEIX, G ;
FRELAT, G ;
SCHMITZ, A ;
SAMBUCY, JL ;
BOSCH, A ;
ESTIVILL, X ;
WEISSENBACH, J ;
VIGNAL, A ;
RIETHMAN, H ;
COX, D ;
PATTERSON, D ;
GARDINER, K ;
HATTORI, M ;
SAKAKI, Y ;
ICHIKAWA, H ;
OHKI, M ;
LEPASLIER, D ;
HEILIG, R ;
ANTONARAKIS, S ;
COHEN, D .
NATURE, 1992, 359 (6394) :380-387
[6]   3.6-MB GENOMIC AND YAC PHYSICAL MAP OF THE DOWN-SYNDROME CHROMOSOME REGION ON CHROMOSOME-21 [J].
DUFRESNEZACHARIA, MC ;
DAHMANE, N ;
THEOPHILE, D ;
ORTI, R ;
CHETTOUH, Z ;
SINET, PM ;
DELABAR, JM .
GENOMICS, 1994, 19 (03) :462-469
[7]  
Epstein C, 1986, CONSEQUENCES CHROMOS
[8]   A NOTI RESTRICTION MAP OF THE ENTIRE LONG ARM OF HUMAN CHROMOSOME-21 [J].
ICHIKAWA, H ;
HOSODA, F ;
ARAI, Y ;
SHIMIZU, K ;
OHIRA, M ;
OHKI, M .
NATURE GENETICS, 1993, 4 (04) :361-366
[9]   DOWN-SYNDROME PHENOTYPES - THE CONSEQUENCES OF CHROMOSOMAL IMBALANCE [J].
KORENBERG, JR ;
CHEN, XN ;
SCHIPPER, R ;
SUN, Z ;
GONSKY, R ;
GERWEHR, S ;
CARPENTER, N ;
DAUMER, C ;
DIGNAN, P ;
DISTECHE, C ;
GRAHAM, JM ;
HUGDINS, L ;
MCGILLIVRAY, B ;
MIYAZAKI, K ;
OGASAWARA, N ;
PARK, JP ;
PAGON, R ;
PUESCHEL, S ;
SACK, G ;
SAY, B ;
SCHUFFENHAUER, S ;
SOUKUP, S ;
YAMANAKA, T .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (11) :4997-5001
[10]  
LEJEUNE J, 1959, CR HEBD ACAD SCI, V248, P1721