THE DIASTROPHIC DYSPLASIA GENE ENCODES A NOVEL SULFATE TRANSPORTER - POSITIONAL CLONING BY FINE-STRUCTURE LINKAGE DISEQUILIBRIUM MAPPING

被引:596
作者
HASTBACKA, J
DELACHAPELLE, A
MAHTANI, MM
CLINES, G
REEVEDALY, MP
DALY, M
HAMILTON, BA
KUSUMI, K
TRIVEDI, B
WEAVER, A
COLOMA, A
LOVETT, M
BUCKLER, A
KAITILA, I
LANDER, ES
机构
[1] UNIV HELSINKI, DEPT MED GENET, SF-00014 HELSINKI, FINLAND
[2] FOLKHALSAN INST GENET, SF-00014 HELSINKI, FINLAND
[3] UNIV TEXAS, SW MED CTR, DEPT BIOCHEM, DALLAS, TX 75235 USA
[4] UNIV TEXAS, SW MED CTR, MCDERMOTT CTR, DALLAS, TX 75235 USA
[5] MIT, DEPT BIOL, CAMBRIDGE, MA 02139 USA
[6] MASSACHUSETTS GEN HOSP, DEPT NEUROGENET, BOSTON, MA 02129 USA
[7] UNIV HELSINKI, CENT HOSP, DEPT MED GENET, SF-00290 HELSINKI, FINLAND
关键词
D O I
10.1016/0092-8674(94)90281-X
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Diastrophic dysplasia (DTD) is a well-characterized autosomal recessive osteochondrodysplasia with clinical features including dwarfism, spinal deformation, and specific joint abnormalities. The disease occurs in most populations, but is particularly prevalent in Finland owing to an apparent founder effect. DTD maps to distal chromosome 5q and, based on linkage disequilibrium studies in the Finnish population, we had previously predicted that the DTD gene should lie about 64 kb away from the CSF1R locus. Here, we report the positional cloning of the DTD gene by finestructure linkage disequilibrium mapping. The gene lies in the predicted location, approximately 70 kb proximal to CSF1R, and encodes a novel sulfate transporter. Impaired function of its product is likely to lead to undersulfation of proteoglycans in cartilage matrix and thereby to cause the clinical phenotype of the disease. These results demonstrate the power of linkage disequilibrium mapping in isolated populations for positional cloning.
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页码:1073 / 1087
页数:15
相关论文
共 83 条
[1]  
AKSENTIJEVICH I, 1993, AM J HUM GENET, V53, P644
[2]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[3]  
BISSIG M, 1994, J BIOL CHEM, V269, P3017
[4]  
CABANTCHIK ZI, 1978, BIOCHIM BIOPHYS ACTA, V515, P239
[5]  
Cavalcanti F, 1992, Acta Neurol (Napoli), V14, P519
[6]   A SEQUENCE ASSEMBLY AND EDITING PROGRAM FOR EFFICIENT MANAGEMENT OF LARGE PROJECTS [J].
DEAR, S ;
STADEN, R .
NUCLEIC ACIDS RESEARCH, 1991, 19 (14) :3907-3911
[7]   DISEASE GENE-MAPPING IN ISOLATED HUMAN-POPULATIONS - THE EXAMPLE OF FINLAND [J].
DELACHAPELLE, A .
JOURNAL OF MEDICAL GENETICS, 1993, 30 (10) :857-865
[8]  
DEVRIES BJ, 1986, J RHEUMATOL, V13, P686
[9]   ABNORMALITY OF TYPE-IX COLLAGEN IN A PATIENT WITH DIASTROPHIC DYSPLASIA [J].
DIAB, M ;
WU, JJ ;
SHAPIRO, F ;
EYRE, D .
AMERICAN JOURNAL OF MEDICAL GENETICS, 1994, 49 (04) :402-409
[10]  
DUANCE VC, 1990, ANN NY ACAD SCI, V580, P480