3-CARBOXY-CIS,CIS-MUCONATE LACTONIZING ENZYME FROM PSEUDOMONAS-PUTIDA IS HOMOLOGOUS TO THE CLASS-II FUMARASE FAMILY - A NEW REACTION IN THE EVOLUTION OF A MECHANISTIC MOTIF

被引:63
作者
WILLIAMS, SE
WOOLRIDGE, EM
RANSOM, SC
LANDRO, JA
BABBITT, PC
KOZARICH, JW
机构
[1] UNIV MARYLAND, DEPT CHEM & BIOCHEM, COLL PK, MD 20742 USA
[2] UNIV MARYLAND, CTR AGR BIOTECHNOL, COLL PK, MD 20742 USA
[3] UNIV CALIF SAN FRANCISCO, SCH PHARM, DEPT PHARMACEUT CHEM, SAN FRANCISCO, CA 94143 USA
关键词
D O I
10.1021/bi00155a033
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The gene (pcaB) for 3-carboxymuconate lactonizing enzyme (CMLE; 3-carboxymuconate cycloisomerase; EC 5.5.1.2) from Pseudomonas putida has been cloned into pMG27NS, a temperature-sensitive expression vector, and expressed in Escherichia coli N4830. The specific activity and kinetic parameters of the recombinant CMLE were comparable to those previously reported. A comparison of the deduced amino acid sequence of CMLE with sequences available in the PIR and Genbank databases revealed that CMLE has highly significant sequence homology to the class II fumarase family, particularly to adenylosuccinate lyase from Bacillus subtilis. CMLE has no significant homology to muconate lactonizing enzyme (MLE) from P. putida, its sister enzyme in the beta-ketoadipate pathway. These findings fully corroborate a prediction made by us on the basis of mechanistic and stereochemical analyses of CMLE and MLE [Chari, R. V. J., Whitman, C. P., Kozarich, J. W., Ngai, K.-L., & Ornston, L. N. (1987) J. Am. Chem.Soc. 109, 5514-5519] and suggest that CMLE and MLE were recruited into this specialized pathway from two different enzyme families.
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页码:9768 / 9776
页数:9
相关论文
共 53 条
[1]   STEREOCHEMISTRY OF BETA-CARBOXY-AND BETA-HYDROXYMETHYL-MUCONIC DERIVATIVES [J].
AINSWORTH, AT ;
KIRBY, GW .
JOURNAL OF THE CHEMICAL SOCIETY C-ORGANIC, 1968, (12) :1483-+
[2]  
ALTSCHUL SF, 1986, B MATH BIOL, V48, P603, DOI 10.1016/S0092-8240(86)90010-8
[3]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[4]   THE NUCLEOTIDE-SEQUENCE OF THE YEAST ARG4 GENE [J].
BEACHAM, IR ;
SCHWEITZER, BW ;
WARRICK, HM ;
CARBON, J .
GENE, 1984, 29 (03) :271-279
[5]  
BENNER SA, 1989, TOP STEREOCHEM, V19, P127
[6]   THE GENBANK GENETIC SEQUENCE DATA-BANK [J].
BILOFSKY, HS ;
BURKS, C ;
FICKETT, JW ;
GOAD, WB ;
LEWITTER, FI ;
RINDONE, WP ;
SWINDELL, CD ;
TUNG, CS .
NUCLEIC ACIDS RESEARCH, 1986, 14 (01) :1-4
[7]   ABSOLUTE STEREOCHEMICAL COURSE OF MUCONOLACTONE DELTA-ISOMERASE AND OF 4-CARBOXYMUCONOLACTONE DECARBOXYLASE - A H-1-NMR RICOCHET ANALYSIS [J].
CHARI, RVJ ;
WHITMAN, CP ;
KOZARICH, JW ;
NGAI, KL ;
ORNSTON, LN .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1987, 109 (18) :5520-5521
[8]   ABSOLUTE STEREOCHEMICAL COURSE OF THE 3-CARBOXYMUCONATE CYCLOISOMERASES FROM PSEUDOMONAS-PUTIDA AND ACINETOBACTER-CALCOACETICUS - ANALYSIS AND IMPLICATIONS [J].
CHARI, RVJ ;
WHITMAN, CP ;
KOZARICH, JW ;
NGAI, KL ;
ORNSTON, LN .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1987, 109 (18) :5514-5519
[9]  
CLARKE PH, 1984, MICROBIAL DEGRADATIO, V13, P11
[10]   THE ARGININOSUCCINATE LYASE GENE OF CHLAMYDOMONAS-REINHARDTII - AN IMPORTANT TOOL FOR NUCLEAR TRANSFORMATION AND FOR CORRELATING THE GENETIC AND MOLECULAR MAPS OF THE ARG7 LOCUS [J].
DEBUCHY, R ;
PURTON, S ;
ROCHAIX, JD .
EMBO JOURNAL, 1989, 8 (10) :2803-2809