MODELING OF ELECTROSTATIC INTERACTIONS BETWEEN NUCLEOTIDE BASES USING DISTRIBUTED MULTIPOLES

被引:24
作者
TROLLOPE, KI [1 ]
GOULD, IR [1 ]
HILLIER, IH [1 ]
机构
[1] UNIV MANCHESTER,DEPT CHEM,MANCHESTER M13 9PL,LANCS,ENGLAND
关键词
D O I
10.1016/0009-2614(93)87211-K
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The use of distributed multipoles to model the electrostatic interactions in dimers and trimers of nucleotide bases results in interaction energies in good agreement with experiment and with ab initio calculations.
引用
收藏
页码:113 / 116
页数:4
相关论文
共 16 条
[1]   RECOGNITION OF DOUBLE HELICAL DNA BY ALTERNATE STRAND TRIPLE HELIX FORMATION [J].
BEAL, PA ;
DERVAN, PB .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (13) :4976-4982
[2]   A TRANSFERABLE DISTRIBUTED MULTIPOLE MODEL FOR THE ELECTROSTATIC INTERACTIONS OF PEPTIDES AND AMIDES [J].
FAERMAN, CH ;
PRICE, SL .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1990, 112 (12) :4915-4926
[3]  
GOULD IR, UNPUB
[4]  
GUEST MF, GAMESS USERS GUIDE R
[5]  
Hehre W.J., 1986, AB INITIO MOL ORBITA
[6]   NONEMPIRICAL CALCULATIONS ON ALL THE 29 POSSIBLE DNA-BASE PAIRS [J].
HOBZA, P ;
SANDORFY, C .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1987, 109 (05) :1302-1307
[7]   Theory of Solutions of Molecules Containing Widely Separated Charges with Special Application to Zwitterions [J].
Kirkwood, John G. .
JOURNAL OF CHEMICAL PHYSICS, 1934, 2 (07)
[8]   ENZYMATIC INCORPORATION OF A NEW BASE PAIR INTO DNA AND RNA EXTENDS THE GENETIC ALPHABET [J].
PICCIRILLI, JA ;
KRAUCH, T ;
MORONEY, SE ;
BENNER, SA .
NATURE, 1990, 343 (6253) :33-37
[9]   OPLS POTENTIAL FUNCTIONS FOR NUCLEOTIDE BASES - RELATIVE ASSOCIATION CONSTANTS OF HYDROGEN-BONDED BASE-PAIRS IN CHLOROFORM [J].
PRANATA, J ;
WIERSCHKE, SG ;
JORGENSEN, WL .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1991, 113 (08) :2810-2819
[10]   FAST GEOMETRY OPTIMIZATION IN SELF-CONSISTENT REACTION FIELD COMPUTATIONS ON SOLVATED MOLECULES [J].
RINALDI, D ;
RIVAIL, JL ;
RGUINI, N .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1992, 13 (06) :675-680