A 4TH EXAMPLE SUGGESTS THAT PREMATURE TERMINATION CODONS IN THE COL2A1 GENE ARE A COMMON-CAUSE OF THE STICKLER SYNDROME - ANALYSIS OF THE COL2A1 GENE BY DENATURING GRADIENT GEL-ELECTROPHORESIS

被引:65
作者
RITVANIEMI, P
HYLAND, J
IGNATIUS, J
KIVIRIKKO, KI
PROCKOP, DJ
ALAKOKKO, L
机构
[1] THOMAS JEFFERSON UNIV,JEFFERSON MED COLL,JEFFERSON INST MOLEC MED,DEPT BIOCHEM & MOLEC BIOL,PHILADELPHIA,PA 19107
[2] UNIV OULU,BIOCTR,COLLAGEN RES UNIT,SF-90100 OULU 10,FINLAND
[3] UNIV OULU,DEPT MED BIOCHEM,SF-90100 OULU 10,FINLAND
[4] UNIV HELSINKI,DEPT MED GENET,SF-00100 HELSINKI 10,FINLAND
关键词
D O I
10.1006/geno.1993.1306
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A series of oligonucleotide primers was designed to generate polymerase chain reaction products that contained exons 6 to 49 of the human gene for type II procollagen (COL2A1) and that could be used to detect sequence variations by denaturing gradient gel electrophoresis. To improve the sensitivity of the analysis, GC clamps were introduced into one primer of each pair. The procedure successfully detected 10 neutral single-base variations in the gene. In addition, the procedure detected a single-base deletion in exon 43 that introduced a premature termination codon in exon 44 and caused the Stickler syndrome (arthro-ophthalmopathy) in one family. The mutation is the fourth mutation in the COL2A1 gene shown to cause the Stickler syndrome. The mutation is similar to the first three mutations causing the disease in that they also introduced premature termination signals. Since only one mutation introducing a premature termination codon was found in the course of defining 120 or more mutations in type I and III procollagens, the results suggest that such mutations may have a special relationship to the Stickler syndrome. © 1994 Academic Press. All rights reserved.
引用
收藏
页码:218 / 221
页数:4
相关论文
共 13 条
[1]   EFFICIENT PROCEDURE FOR PREPARING COSMID LIBRARIES FROM MICROGRAM QUANTITIES OF GENOMIC DNA FRAGMENTS SIZE FRACTIONATED BY GEL-ELECTROPHORESIS [J].
ALAKOKKO, L ;
PROCKOP, DJ .
MATRIX, 1990, 10 (05) :279-284
[2]   COMPLETION OF THE INTRON EXON STRUCTURE OF THE GENE FOR HUMAN TYPE-II PROCOLLAGEN (COL2A1) - VARIATIONS IN THE NUCLEOTIDE-SEQUENCES OF THE ALLELES FROM 3 CHROMOSOMES [J].
ALAKOKKO, L ;
PROCKOP, DJ .
GENOMICS, 1990, 8 (03) :454-460
[3]   OSTEOGENESIS IMPERFECTA [J].
BYERS, PH ;
STEINER, RD .
ANNUAL REVIEW OF MEDICINE, 1992, 43 :269-282
[4]   OPTIMAL CONDITIONS FOR DIRECTLY SEQUENCING DOUBLE-STRANDED PCR PRODUCTS WITH SEQUENASE [J].
CASANOVA, JL ;
PANNETIER, C ;
JAULIN, C ;
KOURILSKY, P .
NUCLEIC ACIDS RESEARCH, 1990, 18 (13) :4028-4028
[5]  
DIETZ HC, 1992, AM J HUM GENET, V51, pA200
[6]   DNA FRAGMENTS DIFFERING BY SINGLE BASE-PAIR SUBSTITUTIONS ARE SEPARATED IN DENATURING GRADIENT GELS - CORRESPONDENCE WITH MELTING THEORY [J].
FISCHER, SG ;
LERMAN, LS .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1983, 80 (06) :1579-1583
[7]   SEVERE DEFICIENCY OF CYSTIC-FIBROSIS TRANSMEMBRANE CONDUCTANCE REGULATOR MESSENGER-RNA CARRYING NONSENSE MUTATIONS R553X AND W1316X IN RESPIRATORY EPITHELIAL-CELLS OF PATIENTS WITH CYSTIC-FIBROSIS [J].
HAMOSH, A ;
TRAPNELL, BC ;
ZEITLIN, PL ;
MONTROSERAFIZADEH, C ;
ROSENSTEIN, BJ ;
CRYSTAL, RG ;
CUTTING, GR .
JOURNAL OF CLINICAL INVESTIGATION, 1991, 88 (06) :1880-1885
[8]  
KIVIRIKKO KL, 1993, IN PRESS ANN MED
[9]   MUTATIONS IN COLLAGEN GENES - CAUSES OF RARE AND SOME COMMON DISEASES IN HUMANS [J].
KUIVANIEMI, H ;
TROMP, G ;
PROCKOP, DJ .
FASEB JOURNAL, 1991, 5 (07) :2052-2060
[10]  
Myers R. M., 1988, Genome analysis: a practical approach., P95