ATOMIC MODEL OF A PYRIMIDINE DIMER EXCISION-REPAIR ENZYME COMPLEXED WITH A DNA SUBSTRATE - STRUCTURAL BASIS FOR DAMAGED DNA RECOGNITION

被引:242
作者
VASSYLYEV, DG [1 ]
KASHIWAGI, T [1 ]
MIKAMI, Y [1 ]
ARIYOSHI, M [1 ]
IWAI, S [1 ]
OHTSUKA, E [1 ]
MORIKAWA, K [1 ]
机构
[1] HOKKAIDO UNIV,FAC PHARMACEUT SCI,KITA KU,SAPPORO,HOKKAIDO 060,JAPAN
关键词
D O I
10.1016/0092-8674(95)90190-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
T4 endonuclease V is a DNA repair enzyme from bacteriophage T4 that catalyzes the first reaction step of the pyrimidine dimer-specific base excision repair pathway. The crystal structure of this enzyme complexed with a duplex DNA substrate, containing a thymine dimer, has been determined at 2.75 Angstrom resolution, The atomic structure of the complex reveals the unique conformation of the DNA duplex, which exhibits a sharp kink with a 60 degrees inclination at the central thymine dimer, The adenine base complementary to the 5' side of the thymine dimer is completely flipped out of the DNA duplex and trapped in a cavity on the protein surface. These structural features allow an understanding of the catalytic mechanism and implicate a general mechanism of how other repair enzymes recognize damaged DNA duplexes.
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页码:773 / 782
页数:10
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