CHEMICAL NUCLEASE ACTIVITY OF 5-PHENYL-1,10-PHENANTHROLINE-COPPER ION DETECTS INTERMEDIATES IN TRANSCRIPTION INITIATION BY ESCHERICHIA-COLI RNA-POLYMERASE

被引:67
作者
THEDERAHN, T
SPASSKY, A
KUWABARA, MD
SIGMAN, DS
机构
[1] UNIV CALIF LOS ANGELES,SCH MED,DEPT BIOL CHEM,LOS ANGELES,CA 90024
[2] UNIV CALIF LOS ANGELES,INST MOLEC BIOL,LOS ANGELES,CA 90024
[3] INST PASTEUR,F-75724 PARIS 15,FRANCE
关键词
D O I
10.1016/0006-291X(90)92386-E
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The nuclease activity of the copper complex of 5-phenyl-1,10-phenanthroline (5-φ-OP-CU) detects conformational changes in the lac UV-5 promoter caused by E. Coli RNA polymerase. The template strand in melted regions of initiation complexes upstream of the site of nucleotide triphosphate incorporation is very reactive. In open and elongation complexes, downstream scission sites (e. g. +4 and +5 for the open complex) on both strands are observed. The patterns of both downstream cutting sites suggest an atypical double helix at the leading edge of the transcription bubble. © 1990.
引用
收藏
页码:756 / 762
页数:7
相关论文
共 15 条
[1]   CLEAVAGE OF DNA WITH METHIDIUMPROPYL-EDTA-IRON(II) - REACTION CONDITIONS AND PRODUCT ANALYSES [J].
HERTZBERG, RP ;
DERVAN, PB .
BIOCHEMISTRY, 1984, 23 (17) :3934-3945
[2]   CLEAVAGE OF DOUBLE HELICAL DNA BY (METHIDIUMPROPYL-EDTA)IRON(II) [J].
HERTZBERG, RP ;
DERVAN, PB .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1982, 104 (01) :313-315
[3]   MAPPING OF SINGLE-STRANDED REGIONS IN DUPLEX DNA AT THE SEQUENCE LEVEL - SINGLE-STRAND-SPECIFIC CYTOSINE METHYLATION IN RNA-POLYMERASE PROMOTER COMPLEXES [J].
KIRKEGAARD, K ;
BUC, H ;
SPASSKY, A ;
WANG, JC .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1983, 80 (09) :2544-2548
[4]  
KOLB A, 1988, J CELL BIOCHEM S, V12, P115
[5]   FOOTPRINTING DNA PROTEIN COMPLEXES INSITU FOLLOWING GEL RETARDATION ASSAYS USING 1,10-PHENANTHROLINE-COPPER ION - ESCHERICHIA-COLI RNA POLYMERASE-LAC PROMOTER COMPLEXES [J].
KUWABARA, MD ;
SIGMAN, DS .
BIOCHEMISTRY, 1987, 26 (23) :7234-7238
[6]   SCISSION OF RNA BY THE CHEMICAL NUCLEASE OF 1,10-PHENANTHROLINE-COPPER ION - PREFERENCE FOR SINGLE-STRANDED LOOPS [J].
MURAKAWA, GJ ;
CHEN, CHB ;
KUWABARA, MD ;
NIERLICH, DP ;
SIGMAN, DS .
NUCLEIC ACIDS RESEARCH, 1989, 17 (13) :5361-5375
[7]  
PHELPS DC, 1975, ELECTRON TRANSFER CH, P385
[8]  
SASSEDWIGHT S, 1989, J BIOL CHEM, V264, P8074
[9]   NUCLEASE ACTIVITY OF 1,10-PHENANTHROLINE COPPER-ION [J].
SIGMAN, DS .
ACCOUNTS OF CHEMICAL RESEARCH, 1986, 19 (06) :180-186
[10]   NUCLEASE ACTIVITY OF 1,10-PHENANTHROLINE COPPER-ION - CONFORMATIONAL-ANALYSIS AND FOOTPRINTING OF THE LAC OPERON [J].
SPASSKY, A ;
SIGMAN, DS .
BIOCHEMISTRY, 1985, 24 (27) :8050-8056