SIMULTANEOUS SOLUTION OF THE RNA FOLDING, ALIGNMENT AND PROTOSEQUENCE PROBLEMS

被引:355
作者
SANKOFF, D
机构
关键词
D O I
10.1137/0145048
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
引用
收藏
页码:810 / 825
页数:16
相关论文
共 22 条
[1]  
HIRSCHBERG DS, 1983, TIME WARPS STRING ED, P325
[2]  
Kruskal J.B., 1983, TIME WARPS STRING ED, P265
[3]  
MAINVILLE S, 1981, THESIS U MONTREAL MO
[4]   A GENERAL METHOD APPLICABLE TO SEARCH FOR SIMILARITIES IN AMINO ACID SEQUENCE OF 2 PROTEINS [J].
NEEDLEMAN, SB ;
WUNSCH, CD .
JOURNAL OF MOLECULAR BIOLOGY, 1970, 48 (03) :443-+
[5]   ALGORITHMS FOR LOOP MATCHINGS [J].
NUSSINOV, R ;
PIECZENIK, G ;
GRIGGS, JR ;
KLEITMAN, DJ .
SIAM JOURNAL ON APPLIED MATHEMATICS, 1978, 35 (01) :68-82
[6]  
SALSER W, 1977, COLD SPRING HARB SYM, V42, P985
[7]   FREQUENCY OF INSERTION-DELETION, TRANSVERSION, AND TRANSITION IN EVOLUTION OF 5S RIBOSOMAL-RNA [J].
SANKOFF, D ;
CEDERGREN, RJ ;
LAPALME, G .
JOURNAL OF MOLECULAR EVOLUTION, 1976, 7 (02) :133-149
[9]   LOCATING VERTICES OF A STEINER TREE IN AN ARBITRARY METRIC SPACE [J].
SANKOFF, D ;
ROUSSEAU, P .
MATHEMATICAL PROGRAMMING, 1975, 9 (02) :240-246
[10]   EVOLUTION OF 5S RNA AND NON-RANDOMNESS OF BASE REPLACEMENT [J].
SANKOFF, D ;
MOREL, C ;
CEDERGREN, RJ .
NATURE-NEW BIOLOGY, 1973, 245 (147) :232-234