FRACTALITY OF DNA TEXTS

被引:17
作者
BOROVK, AS [1 ]
FRANKKAMENETSKII, MD [1 ]
GROSBERG, AY [1 ]
机构
[1] RUSSIAN ACAD SCI,INST CHEM PHYS,MOSCOW 117977,RUSSIA
关键词
D O I
10.1080/07391102.1994.10508765
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
By performing several statistical tests, we confirm that long-range correlations exist and are typical for long eukaryotic DNA sequences. Different types of ''critical exponents'' for characterization of DNA fractality are discussed As to possible explanation of the phenomenon, our computer simulations indicate that simple mosaic structure of genome, without correlations between blocks, cannot be solely accounted for the observed statistical properties of DNA texts, We propose the concept of ''fractal patchiness'', which fully explains statistical observations, and shed light on the possible origin of long-range correlations in DNA sequences.
引用
收藏
页码:655 / 669
页数:15
相关论文
共 30 条
[1]   MATHEMATICAL BIOLOGY - DNA SHOWS UNEXPLAINED PATTERNS WRIT LARGE [J].
AMATO, I .
SCIENCE, 1992, 257 (5071) :747-747
[2]  
[Anonymous], 1979, SCALING CONCEPTS POL
[3]   ANALYSIS OF APPARENT 1/F-ALPHA SPECTRUM IN DNA-SEQUENCES [J].
BORSTNIK, B ;
PUMPERNIK, D ;
LUKMAN, D .
EUROPHYSICS LETTERS, 1993, 23 (06) :389-394
[4]   GENERALIZED LEVY-WALK MODEL FOR DNA NUCLEOTIDE-SEQUENCES [J].
BULDYREV, SV ;
GOLDBERGER, AL ;
HAVLIN, S ;
PENG, CK ;
SIMONS, M ;
STANLEY, HE .
PHYSICAL REVIEW E, 1993, 47 (06) :4514-4523
[5]  
CHATZIDIMITRIOU.CA, 1993, NATURE, V361, P212
[6]   DYNAMICS AND COMPLEXITY OF BIOMOLECULES [J].
EBELING, W ;
FEISTEL, R ;
HERZEL, H .
PHYSICA SCRIPTA, 1987, 35 (05) :761-768
[7]  
Feder J., 1988, FRACTALS PLENUM PRES
[8]   CRUMPLED GLOBULE MODEL OF THE 3-DIMENSIONAL STRUCTURE OF DNA [J].
GROSBERG, A ;
RABIN, Y ;
HAVLIN, S ;
NEER, A .
EUROPHYSICS LETTERS, 1993, 23 (05) :373-378
[9]  
GROSBERG AY, 1993, BIOFIZIKA+, V38, P75
[10]  
GUTIN AM, COMMUNICATION