CRYSTALLOGRAPHIC STUDIES OF THE INTERACTION OF CYCLODEXTRIN GLYCOSYLTRANSFERASE FROM BACILLUS-CIRCULANS STRAIN-251 WITH NATURAL SUBSTRATES AND PRODUCTS

被引:146
作者
KNEGTEL, RMK
STROKOPYTOV, B
PENNINGA, D
FABER, OG
ROZEBOOM, HJ
KALK, KH
DIJKHUIZEN, L
DIJKSTRA, BW
机构
[1] UNIV GRONINGEN,BIOSON RES INST,9747 AG GRONINGEN,NETHERLANDS
[2] UNIV GRONINGEN,GRONINGEN BIOMOLEC SCI & BIOTECHNOL INST,BIOPHYS CHEM LAB,9747 AG GRONINGEN,NETHERLANDS
[3] UNIV GRONINGEN,GRONINGEN BIOMOLEC SCI & BIOTECHNOL INST,DEPT MICROBIOL,9751 NN HAREN,NETHERLANDS
关键词
D O I
10.1074/jbc.270.49.29256
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Asp-229, Glu-257, and Asp-328 constitute the catalytic residues in cyclodextrin glycosyl transferase from Bacillus circulans strain 251. Via site-directed mutagenesis constructed D229N, E257Q, and D328N mutant proteins showed a 4,000-60,000 fold reduction of cyclization activity. A D229N/E257Q double mutant showed a 700,000-fold reduction and was crystallized for use in soaking experiments with alpha-cyclodextrin. Crystal structures were determined of wild type CGTase soaked at elevated pH with alpha cyclodextrin (resolution, 2.1 Angstrom) and maltoheptaose (2.4 Angstrom). In addition, structures at cryogenic temperature were solved of the unliganded enzyme (2.2 Angstrom) and of the D229N/E257Q mutant after soaking with alpha-cyclodextrin (2.6 Angstrom). In the crystals soaked in alpha-cyclodextrin and maltoheptaose, a maltotetraose molecule is observed to bind in the active site. Residue 229 is at hydrogen bonding distance from the C-6 hydroxyl group of the sugar, which after cleavage will contain the new reducing end. In the D229N/E257Q double mutant structure, two alpha-cyclodextrins are observed to replace two maltoses at the E-domain, thus providing structural information on product inhibition via binding to the enzyme's ram starch binding domain.
引用
收藏
页码:29256 / 29264
页数:9
相关论文
共 46 条
[1]   PROTEIN DATA BANK - COMPUTER-BASED ARCHIVAL FILE FOR MACROMOLECULAR STRUCTURES [J].
BERNSTEIN, FC ;
KOETZLE, TF ;
WILLIAMS, GJB ;
MEYER, EF ;
BRICE, MD ;
RODGERS, JR ;
KENNARD, O ;
SHIMANOUCHI, T ;
TASUMI, M .
JOURNAL OF MOLECULAR BIOLOGY, 1977, 112 (03) :535-542
[2]   CALCULATION OF AN OMIT MAP [J].
BHAT, TN .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1988, 21 :279-281
[3]   CRYSTALLOGRAPHIC STUDIES OF ACTIVITY OF HEN EGE-WHITE LYSOZYME [J].
BLAKE, CCF ;
JOHNSON, LN ;
MAIR, GA ;
NORTH, ACT ;
PHILLIPS, DC ;
SARMA, VR .
PROCEEDINGS OF THE ROYAL SOCIETY SERIES B-BIOLOGICAL SCIENCES, 1967, 167 (1009) :378-+
[4]  
BRON S, 1990, MODERN MICROBIOLOGIC, P146
[5]   ASSESSMENT OF PHASE ACCURACY BY CROSS VALIDATION - THE FREE R-VALUE - METHODS AND APPLICATIONS [J].
BRUNGER, AT .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1993, 49 :24-36
[6]   ACCURATE BOND AND ANGLE PARAMETERS FOR X-RAY PROTEIN-STRUCTURE REFINEMENT [J].
ENGH, RA ;
HUBER, R .
ACTA CRYSTALLOGRAPHICA SECTION A, 1991, 47 :392-400
[7]  
FRENCH D, 1957, ADV CARBOHYD CHEM, V12, P189
[8]   ANALYSIS OF MUTATIONS IN CYCLODEXTRIN GLUCANOTRANSFERASE FROM BACILLUS-STEAROTHERMOPHILUS WHICH AFFECT CYCLIZATION CHARACTERISTICS AND THERMOSTABILITY [J].
FUJIWARA, S ;
KAKIHARA, H ;
SAKAGUCHI, K ;
IMANAKA, T .
JOURNAL OF BACTERIOLOGY, 1992, 174 (22) :7478-7481
[9]   CRYSTAL-STRUCTURE OF THE MUTANT D52S HEN EGG-WHITE LYSOZYME WITH AN OLIGOSACCHARIDE PRODUCT [J].
HADFIELD, AT ;
HARVEY, DJ ;
ARCHER, DB ;
MACKENZIE, DA ;
JEENES, DJ ;
RADFORD, SE ;
LOWE, G ;
DOBSON, CM ;
JOHNSON, LN .
JOURNAL OF MOLECULAR BIOLOGY, 1994, 243 (05) :856-872
[10]   CRYOCRYSTALLOGRAPHY OF BIOLOGICAL MACROMOLECULES - A GENERALLY APPLICABLE METHOD [J].
HOPE, H .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1988, 44 :22-26