KNOWLEDGE-BASED POTENTIALS FOR PROTEINS

被引：467

作者：

SIPPL, MJ

机构：

[1] Center for Applied Molecular Engineering, Institute for Chemistry and Biochemistry, University of Salzburg, A-5020 Salzburg

来源：

CURRENT OPINION IN STRUCTURAL BIOLOGY | 1995年 / 5卷 / 02期

关键词：

D O I：

10.1016/0959-440X(95)80081-6

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

Knowledge based potentials and energy functions are extracted from a number of databases of known protein structures. Recent developments have shown that this type of potential is successful in many areas of protein structure research. Among these are quality assessment and error recognition of folds and the prediction of unknown structures by fold-recognition techniques.

引用

页码：229 / 235

页数：7

共 56 条

[1] TOWARDS PROTEIN-FOLDING BY GLOBAL ENERGY OPTIMIZATION
ABAGYAN, RA
[J]. FEBS LETTERS, 1993, 325 (1-2) : 17 - 22
[2] USE OF A POTENTIAL OF MEAN FORCE TO ANALYZE FREE-ENERGY CONTRIBUTIONS IN PROTEIN FOLDING
AVBELJ, F
[J]. BIOCHEMISTRY, 1992, 31 (27) : 6290 - 6297
[3] AN IMPROVED PAIR POTENTIAL TO RECOGNIZE NATIVE PROTEIN FOLDS
BAUER, A
BEYER, A
[J]. PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1994, 18 (03): : 254 - 261
[4] PROTEIN DATA BANK - COMPUTER-BASED ARCHIVAL FILE FOR MACROMOLECULAR STRUCTURES
BERNSTEIN, FC
KOETZLE, TF
WILLIAMS, GJB
MEYER, EF
BRICE, MD
RODGERS, JR
KENNARD, O
SHIMANOUCHI, T
TASUMI, M
[J]. JOURNAL OF MOLECULAR BIOLOGY, 1977, 112 (03) : 535 - 542
[5] A METHOD TO IDENTIFY PROTEIN SEQUENCES THAT FOLD INTO A KNOWN 3-DIMENSIONAL STRUCTURE
BOWIE, JU
LUTHY, R
EISENBERG, D
[J]. SCIENCE, 1991, 253 (5016) : 164 - 170
[6] INVERTED PROTEIN-STRUCTURE PREDICTION
BOWIE, JU
EISENBERG, D
[J]. CURRENT OPINION IN STRUCTURAL BIOLOGY, 1993, 3 (03) : 437 - 444
[7] BETWEEN OBJECTIVITY AND SUBJECTIVITY
BRANDEN, CI
JONES, TA
[J]. NATURE, 1990, 343 (6260) : 687 - 689
[8] AN EMPIRICAL ENERGY FUNCTION FOR THREADING PROTEIN-SEQUENCE THROUGH THE FOLDING MOTIF
BRYANT, SH
LAWRENCE, CE
[J]. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 1993, 16 (01) : 92 - 112
[9] SOLVATION ENERGY IN PROTEIN FOLDING AND BINDING
EISENBERG, D
MCLACHLAN, AD
[J]. NATURE, 1986, 319 (6050) : 199 - 203
[10] Fasman G. D., 1989, PREDICTION PROTEIN S, P193

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