CPROP - A RULE-BASED PROGRAM FOR CONSTRUCTING GENETIC MAPS

被引:19
作者
LETOVSKY, S
BERLYN, MB
机构
[1] YALE UNIV,DEPT BIOL,NEW HAVEN,CT 06520
[2] YALE UNIV,SCH FORESTRY & ENVIRONM STUDIES,NEW HAVEN,CT 06520
关键词
D O I
10.1016/0888-7543(92)90432-R
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Gene mapping assigns chromosomal coordinates to genetic loci based on analysis of fragmentary ordering and metric data. In assembling genetic maps, geneticists use rules of inference to derive new facts about order and distance between loci from experimentally derived conclusions about order and distance. They construct comprehensive maps by merging related sets of data and resolving conflicts between them. In this article we describe software that formalizes and automates some of these rules of inference to yield a useful map construction utility called CPROP. © 1992.
引用
收藏
页码:435 / 446
页数:12
相关论文
共 18 条
[1]   LINKAGE MAP OF ESCHERICHIA-COLI-K-12, EDITION-7 [J].
BACHMANN, BJ .
MICROBIOLOGICAL REVIEWS, 1983, 47 (02) :180-230
[2]   RECALIBRATED LINKAGE MAP OF ESCHERICHIA-COLI K-12 [J].
BACHMANN, BJ ;
LOW, KB ;
TAYLOR, AL .
BACTERIOLOGICAL REVIEWS, 1976, 40 (01) :116-167
[3]   LINKAGE MAP OF ESCHERICHIA-COLI K-12, EDITION-8 [J].
BACHMANN, BJ .
MICROBIOLOGICAL REVIEWS, 1990, 54 (02) :130-197
[4]  
BACHMANN BJ, 1980, MICROBIOL REV, V44, P1
[5]  
DAVIS E, 1981, THESIS YALE U DEP CO
[6]  
DEAN T, 1985, THESIS YALE U DEP CO
[7]   NETWORK-BASED HEURISTICS FOR CONSTRAINT-SATISFACTION PROBLEMS [J].
DECHTER, R ;
PEARL, J .
ARTIFICIAL INTELLIGENCE, 1987, 34 (01) :1-38
[8]   MAPPING OF THE GENE FOR CYTIDINE DEAMINASE (CDD) IN ESCHERICHIA-COLI-K-12 [J].
JOSEPHSEN, J ;
HAMMERJESPERSEN, K ;
HANSEN, TD .
JOURNAL OF BACTERIOLOGY, 1983, 154 (01) :72-75
[9]  
LANDER E S, 1987, Genomics, V1, P174, DOI 10.1016/0888-7543(87)90010-3
[10]  
MCALLESTER D, 1987, THESIS MIT