CRYSTAL-STRUCTURE AND SEQUENCE-DEPENDENT CONFORMATION OF THE A.G MISPAIRED OLIGONUCLEOTIDE D(CGCAAGCTGGCG)

被引:73
作者
WEBSTER, GD
SANDERSON, MR
SKELLY, JV
NEIDLE, S
SWANN, PF
LI, BF
TICKLE, IJ
机构
[1] INST CANC RES,CANC RES CAMPAIGN,BIOMOLEC STRUCT UNIT,SUTTON SM2 5NG,SURREY,ENGLAND
[2] UNIV LONDON UNIV COLL,DEPT BIOCHEM,LONDON WC1E 6BT,ENGLAND
[3] UNIV LONDON BIRKBECK COLL,DEPT CRYSTALLOG,LONDON WC1E 7HX,ENGLAND
关键词
DNA structure; X-ray crystallography;
D O I
10.1073/pnas.87.17.6693
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The crystal structure of the dodecanucleotide d(CGCAAGCTGGCG) has been determined to a resolution of 2.5 Å and refined to an R factor of 19.3% for 1710 reflections. The sequence crystallizes as a B-type double helix, with two G(anti)·A(syn) base pairs. These are stabilized by three-center hydrogen bonds to pyrimidines that induce perturbations in base-pair geometry. The central AGCT region of the helix has a wide (>6 Å) minor groove.
引用
收藏
页码:6693 / 6697
页数:5
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