A NEW SIMPLIFIED METHOD OF GENE TYPING

被引:10
作者
CHIA, D [1 ]
TERASAKI, P [1 ]
CHAN, H [1 ]
ACALINOVICH, A [1 ]
MARUYA, E [1 ]
SAJI, H [1 ]
WARE, K [1 ]
机构
[1] KYOTO RED CROSS,CTR BLOOD,KYOTO,JAPAN
来源
TISSUE ANTIGENS | 1994年 / 44卷 / 05期
关键词
GENE TYPING; SSP-PCR; TT-PCR; HLA-DRB1;
D O I
10.1111/j.1399-0039.1994.tb02399.x
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
SSP-PCR (sequence-specific primer) DNA typing was performed in Terasaki trays using 1.5 mu l of DNA, and the ethidium-stained PCR product was measured by direct fluorometric reading. Elimination of the gel electrophoresis step greatly simplified the SSP method. 17 serological DR specificities were discriminated for 239 DNA samples utilizing the new method, standard SSP, sequence-specific oligonucleotide probe (SSOP), and restriction fragment length polymorphism (PCR-RFLP). Results showed 98% concordance between the SSP-PCR assay and conventional methods. DRB1 alleles were determined by PCR-RFLP in 59 samples, by SSP in 110 samples, and by consensus (all methods) in the remaining samples.
引用
收藏
页码:300 / 305
页数:6
相关论文
共 15 条
[1]   PCR TEST FOR CYSTIC-FIBROSIS DELETION [J].
BALLABIO, A ;
GIBBS, RA ;
CASKEY, CT .
NATURE, 1990, 343 (6255) :220-220
[2]   SEMIAUTOMATED HLA-DQB1 TYPING BY FLUORESCENT DYE PHOTOMETRY OF AMPLIFIED DNA ON MICROTITER PLATES [J].
BEIN, G ;
HAASE, D ;
SCHULT, J ;
EIERMANN, TH ;
KIRCHNER, H .
HUMAN IMMUNOLOGY, 1994, 39 (01) :1-8
[3]   SELECTIVE PCR-RFLP METHOD TO DISTINGUISH HLA-DR1 FROM HLA-DR-BR (DW BON) ALLELES - APPLICATIONS IN CLINICAL HISTOCOMPATIBILITY TESTING [J].
BIGNON, JD ;
CESBRON, A ;
CHENEAU, ML ;
BONNEVILLE, F ;
HERRY, P ;
MULLER, JY .
TISSUE ANTIGENS, 1990, 36 (04) :171-173
[4]   DIRECT-DETECTION OF PCR PRODUCTS FOR HLA CLASS-II TYPING [J].
CHIA, D ;
TERASAKI, P ;
CHAN, H ;
TONAI, R ;
SIAUW, PA .
TISSUE ANTIGENS, 1993, 42 (03) :146-149
[5]   A SIMPLE PHOTOMETRIC DETECTION METHOD FOR HLA-DRB1 SPECIFIC PCR-SSP PRODUCTS [J].
FERENCIK, S ;
GROSSEWILDE, H .
EUROPEAN JOURNAL OF IMMUNOGENETICS, 1993, 20 (02) :123-125
[6]   HLA CLASS-II NUCLEOTIDE-SEQUENCES, 1992 [J].
MARSH, SGE ;
BODMER, JG .
HUMAN IMMUNOLOGY, 1992, 35 (01) :1-17
[7]   ANALYSIS OF ANY POINT MUTATION IN DNA - THE AMPLIFICATION REFRACTORY MUTATION SYSTEM (ARMS) [J].
NEWTON, CR ;
GRAHAM, A ;
HEPTINSTALL, LE ;
POWELL, SJ ;
SUMMERS, C ;
KALSHEKER, N ;
SMITH, JC ;
MARKHAM, AF .
NUCLEIC ACIDS RESEARCH, 1989, 17 (07) :2503-2516
[8]   HLA-DRB1STAR01 SUBTYPING BY ALLELE-SPECIFIC PCR AMPLIFICATION - A SENSITIVE, SPECIFIC AND RAPID TECHNIQUE [J].
OLERUP, O ;
ZETTERQUIST, H .
TISSUE ANTIGENS, 1991, 37 (05) :197-204
[9]  
PARK MS, 1992, CLIN TRANSPLANT, V8, P475
[10]   ENZYMATIC AMPLIFICATION OF BETA-GLOBIN GENOMIC SEQUENCES AND RESTRICTION SITE ANALYSIS FOR DIAGNOSIS OF SICKLE-CELL ANEMIA [J].
SAIKI, RK ;
SCHARF, S ;
FALOONA, F ;
MULLIS, KB ;
HORN, GT ;
ERLICH, HA ;
ARNHEIM, N .
SCIENCE, 1985, 230 (4732) :1350-1354