BASE SEQUENCES OF HIGHLY REPETITIVE COMPONENTS IN NUCLEAR DNAS FROM RAT-LIVER AND RAT-ASCITES HEPATOMA

被引:14
作者
IKEDA, Y [1 ]
NAKAMURA, K [1 ]
IWAKAMI, N [1 ]
HIBINO, Y [1 ]
SUGANO, N [1 ]
机构
[1] TOYAMA MED & PHARMACEUT UNIV,FAC PHARMACEUT SCI,DIV CELL BIOL,SUGITANI,TOYAMA 93001,JAPAN
关键词
ASCITES HEPATOMA; RAT; HIGHLY REPETITIVE DNA; SEQUENCE;
D O I
10.1016/0304-3835(90)90120-M
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
A 370-bp highly repetitive component in each of the nuclear DNAs from rat liver (RL) and rat-ascites hepatoma (AH) was isolated by HindIII digestion and cloned in pUC9. Ten of the resulting clones were arbitrarily selected and sequenced. Heterogeneity of size was found in 7 of the RL clones (366-369 bp), but in only 2 of the AH clones (369 bp). The sequence homology was 64.6% among the RL clones; 80.3% among the AH clones. The base compositions were AT-rich, ranging from 61.1% to 64.7%. Many A and/or T runs consisting of 2-5' bases were interspersed throughout each sequence. The restriction sites reported previously [12], EcoRI, HaeIII, HindIII, HinfI and HphI sites, were confirmed in almost all of the clones. In the present experiment, 12 kinds of the sites were further found in both RL and AH clones.
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页码:201 / 208
页数:8
相关论文
共 20 条
[1]  
ASANO S, 1989, BIOCHEM INT, V19, P871
[2]   MICROTUBULE-ASSOCIATED PROTEIN MAP2 PREFERENTIALLY BINDS TO A DA/DT SEQUENCE PRESENT IN MOUSE SATELLITE DNA [J].
AVILA, J ;
DEGARCINI, EM ;
WANDOSELL, F ;
VILLASANTE, A ;
SOGO, JM ;
VILLANUEVA, N .
EMBO JOURNAL, 1983, 2 (08) :1229-1234
[3]   LOCALIZATION OF HIGHLY REPEATED HINDIII FRAGMENTS OF NOVIKOFF RAT DNA TO THE NUCLEOLUS [J].
FUKE, M ;
DAVIS, FM ;
BUSCH, H .
FEBS LETTERS, 1979, 102 (01) :46-50
[4]   HINDIII-SENSITIVE SITES PRESENT ONCE IN EVERY 4 REPEATS OF ECORI-SENSITIVE SITES IN NOVIKOFF RAT HEPATOMA DNA [J].
FUKE, M ;
BUSCH, H .
FEBS LETTERS, 1979, 99 (01) :136-140
[5]  
FUKE M, 1979, J CELL BIOL, V83, P188
[6]   CHROMATIN SUB-STRUCTURE - DIGESTION OF CHROMATIN DNA AT REGULARLY SPACED SITES BY A NUCLEAR DEOXYRIBONUCLEASE [J].
HEWISH, DR ;
BURGOYNE, LA .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1973, 52 (02) :504-510
[7]   AN ENDODEOXYRIBONUCLEASE ACTIVITY IN NUCLEI FROM RAT-ASCITES HEPATOMA [J].
HIBINO, Y ;
SUGANO, N .
CANCER LETTERS, 1985, 29 (03) :245-254
[8]   DNA BENDING AT ADENINE . THYMINE TRACTS [J].
KOO, HS ;
WU, HM ;
CROTHERS, DM .
NATURE, 1986, 320 (6062) :501-506
[9]   PROCEDURE FOR ISOLATION OF DEOXYRIBONUCLEIC ACID FROM MICRO-ORGANISMS [J].
MARMUR, J .
JOURNAL OF MOLECULAR BIOLOGY, 1961, 3 (02) :208-&
[10]   SATELLITE DNAS CONTAIN SEQUENCES THAT INDUCE CURVATURE [J].
MARTINEZBALBAS, A ;
RODRIGUEZCAMPOS, A ;
GARCIARAMIREZ, M ;
SAINZ, J ;
CARRERA, P ;
AYMAMI, J ;
AZORIN, F .
BIOCHEMISTRY, 1990, 29 (09) :2342-2348