POSITION OF SIDE-CHAIN BRANCHING AND HANDEDNESS OF TURNS AND HELICES OF HOMOPEPTIDES FROM CHIRAL C-ALPHA-METHYLATED AMINO-ACIDS - CRYSTAL-STATE STRUCTURAL-ANALYSIS OF (ALPHA-ME)LEU TRIMER AND TETRAMER

被引:21
作者
AUBRY, A
BAYEUL, D
PRECIGOUX, G
PANTANO, M
FORMAGGIO, F
CRISMA, M
TONIOLO, C
BOESTEN, WHJ
SCHOEMAKER, HE
KAMPHUIS, J
机构
[1] UNIV BORDEAUX 1,CRYSTALLOG & CRYSTALLINE PHYS LAB,F-33405 TALENCE,FRANCE
[2] UNIV PADUA,DEPT ORGAN CHEM,CNR,BIOPOLYMER RES CTR,I-35131 PADUA,ITALY
[3] DSM RES BV,BIOORGAN CHEM SECT,6160 MD GELEEN,NETHERLANDS
来源
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2 | 1994年 / 03期
关键词
D O I
10.1039/p29940000525
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
Terminally blocked homotri- and homotetra-peptides from (alpha Me)Leu, a chiral C-alpha-methylated. gamma-branched alpha-amino acid, have been prepared by solution methods and fully characterized. The molecular and crystal structures of pBrBz-[D-(alpha Me) Leu](3)-OH monohydrate and pBrBz-[D-(alpha Me)-Leu](4)-OBu(t) (where pBrBz indicates p-bromobenzoyl) were determined by X-ray diffraction. The tripeptide carboxylic acid adopts a type-III beta-turn conformation followed by an uncommon oxyanalogue of a type-III beta-turn, the latter being stabilized by a 1<--4 C=O...H-O intramolecular H-bond. The three independent molecules in the asymmetric unit of the tetrapeptide ester are folded in a regular right-handed 3(10)-helix. All (alpha Me)Leu residues exhibit phi, psi torsion angles in the helical region of the conformational map. These results indicate that: (i) the (alpha Me)Leu residue is an effective beta-turn and helix promoter and (ii) the relationship between (alpha Me)Leu chirality and turn and helix handedness is the same as that shown by the gamma-branched (alpha Me)Phe residue. but it is opposite to that characteristic of isovaline (Iva). with a linear side chain. the beta-branched (alpha Me)Val residue and protein amino acids (including Leu).
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页码:525 / 529
页数:5
相关论文
共 45 条
[1]  
ASHIDA T, 1981, INT J PEPT PROT RES, V17, P322
[2]   PEPTIDE-CHAIN STRUCTURE PARAMETERS, BOND ANGLES AND CONFORMATIONAL ANGLES FROM THE CAMBRIDGE STRUCTURAL DATABASE [J].
ASHIDA, T ;
TSUNOGAE, Y ;
TANAKA, I ;
YAMANE, T .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1987, 43 :212-218
[3]   LONG, CHIRAL POLYPEPTIDE-310- HELICES AT ATOMIC RESOLUTION [J].
BAVOSO, A ;
BENEDETTI, E ;
DIBLASIO, B ;
PAVONE, V ;
PEDONE, C ;
TONIOLO, C ;
BONORA, GM ;
FORMAGGIO, F ;
CRISMA, M .
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 1988, 5 (04) :803-817
[4]  
BENEDETTI E, 1983, INT J PEPT PROT RES, V22, P1
[5]  
Benedetti E., 1982, CHEM BIOCH AMINO ACI, V6, P105
[6]   SYNTHESIS, CHARACTERIZATION, AND CONFORMATIONAL STUDIES OF N-TERT-BUTYLOXYCARBONYL-OLIGO-L-LEUCINE METHYL-ESTERS [J].
BONORA, GM ;
MAGLIONE, A ;
TONIOLO, C .
POLYMER, 1974, 15 (12) :767-770
[7]   GEOMETRY OF O-H...O HYDROGEN-BONDS [J].
BROWN, ID .
ACTA CRYSTALLOGRAPHICA SECTION A, 1976, 32 (JAN1) :24-31
[8]  
GORBITZ CH, 1992, INT J PEPT PROT RES, V39, P93
[9]   HYDROGEN-BOND DISTANCES AND ANGLES IN THE STRUCTURES OF AMINO-ACIDS AND PEPTIDES [J].
GORBITZ, CH .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1989, 45 :390-395
[10]   CRYSTAL ENVIRONMENTS AND GEOMETRIES OF LEUCINE, ISOLEUCINE, VALINE, AND PHENYLALANINE PROVIDE ESTIMATES OF MINIMUM NONBONDED CONTACT AND PREFERRED VANDERWAALS INTERACTION DISTANCES [J].
GOULD, RO ;
GRAY, AM ;
TAYLOR, P ;
WALKINSHAW, MD .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1985, 107 (21) :5921-5927