SOLUTION STRUCTURE OF FE(II) CYTOCHROME-C551 FROM PSEUDOMONAS-AERUGINOSA AS DETERMINED BY 2-DIMENSIONAL H-1-NMR

被引:69
作者
DETLEFSEN, DJ
THANABAL, V
PECORARO, VL
WAGNER, G
机构
[1] HARVARD UNIV,SCH MED,DEPT BIOL CHEM & MOLEC PHARMACOL,240 LONGWOOD AVE,BOSTON,MA 02115
[2] UNIV MICHIGAN,WILLARD H DOW LAB,DEPT CHEM,ANN ARBOR,MI 48109
关键词
D O I
10.1021/bi00101a019
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The solution structure of Fe(II) cytochrome c551 from Pseudomonas aeruginosa based on 2D H-1 NMR data is reported. Two sets of structure calculations were completed with a combination of simulated annealing and distance geometry calculations: one set of 20 structures included the heme-peptide covalent linkages, and one set of 10 structures excluded them. The main-chain atoms were well constrained within the two structural ensembles (1.30 and 1.35 angstrom average RMSD, respectively) except for two regions spanning residues 30-40 and 60-70. The results were essentially the same when global fold comparisons were made between the ensembles with an average RMSD of 1.33 angstrom. In total, 556 constraints were used, including 479 NOEs, 53 volume constraints, and 24 other distances. This report represents the first solution structure determination of a heme protein by 2D H-1 NMR and should provide a basis for the application of these techniques to other proteins containing large prosthetic groups or cofactors.
引用
收藏
页码:9040 / 9046
页数:7
相关论文
共 11 条