SURVEY OF MAJOR GENOTYPES AND SUBTYPES OF HEPATITIS-C VIRUS USING RFLP OF SEQUENCES AMPLIFIED FROM THE 5' NONCODING REGION

被引:380
作者
DAVIDSON, F
SIMMONDS, P
FERGUSON, JC
JARVIS, LM
DOW, BC
FOLLETT, EAC
SEED, CRG
KRUSIUS, T
LIN, C
MEDGYESI, GA
KIYOKAWA, H
OLIM, G
DURAISAMY, G
CUYPERS, T
SAEED, AA
TEO, D
CONRADIE, J
KEW, MC
LIN, M
NUCHAPRAYOON, C
NDIMBIE, OK
YAP, PL
机构
[1] ROYAL EDINBURGH & ASSOCIATED HOSP, EDINBURGH & SE SCOTLAND BLOOD TRANSFUS SERV, EDINBURGH EH3 9HB, MIDLOTHIAN, SCOTLAND
[2] UNIV EDINBURGH, DEPT MED MICROBIOL, EDINBURGH EH8 9AG, MIDLOTHIAN, SCOTLAND
[3] RUCHILL HOSP, SCOTTISH NATL BLOOD TRANSFUS SERV MICROBIOL REFER, GLASGOW, LANARK, SCOTLAND
[4] AUSTRALIAN RED CROSS SOC, BLOOD TRANSFUS SERV, PERTH, WA, AUSTRALIA
[5] FINNISH RED CROSS & BLOOD TRANSFUS SERV, SF-00310 HELSINKI, FINLAND
[6] HONG KONG RED CROSS, BLOOD TRANSFUS SERV, YAUMATEI, HONG KONG
[7] NATL INST HAEMATOL BLOOD TRANSFUS & IMMUNOL, H-1113 BUDAPEST, HUNGARY
[8] FUKUOKA RED CROSS, CTR BLOOD TRANSFUS, FUKUOKA 818, JAPAN
[9] MACAU BLOOD TRANSFUS CTR, Macau, Macao, PEOPLES R CHINA
[10] HOSP KUALA LUMPUR, NATL BLOOD SERV CTR, 50586 KUALA LUMPUR, MALAYSIA
[11] NETHERLANDS RED CROSS, BLOOD TRANSFUS SERV,CENT LAB, 1066 CX AMSTERDAM, NETHERLANDS
[12] RIYADH ARMED FORCES HOSP, RIYADH 11159, SAUDI ARABIA
[13] NATL BLOOD CTR, SINGAPORE BLOOD TRANSFUS SERV, SINGAPORE 0316, SINGAPORE
[14] NATAL BLOOD TRANSFUS SERV, NATAL INST IMMUNOL, DURBAN 4000, SOUTH AFRICA
[15] UNIV WITWATERSRAND, SCH MED, JOHANNESBURG, SOUTH AFRICA
[16] MACKAY MEM HOSP, NATL HLTH RES INST,TRANSFUS MED LAB, TAIPEI, TAIWAN
[17] THAI RED CROSS SOC, NATL BLOOD CTR, BANGKOK 10330, THAILAND
[18] CENT BLOOD BANK PITTSBURGH, PITTSBURGH, PA USA
关键词
D O I
10.1099/0022-1317-76-5-1197
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A method is described for identifying different genotypes of hepatitis C virus (HCV) by restriction endonuclease cleavage of sequences amplified by PCR from the 5' non-coding region. Using the enzymes HaeIII-RsaI and HinfI-MvaI, followed by cleavage with BstU1 or ScrFI, it was possible to identify and distinguish HCV genotypes 1a, 1b, 2a, 2b, 3a, 3b, 4, 5 and 6. The method was used to investigate the prevalence of these genotypes in 723 blood donors in 15 countries, the largest survey to date, and one which covered a wide range of geographical regions (Europe, America, Africa and Asia). These results, combined with a review of the existing literature, indicate the existence of several distinct regional patterns of HCV genotype distribution, and provide the framework for future detailed epidemiological investigations of HCV transmission.
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页码:1197 / 1204
页数:8
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