A 4D HCC(CO)NNH EXPERIMENT FOR THE CORRELATION OF ALIPHATIC SIDE-CHAIN AND BACKBONE RESONANCES IN C-13/N-15 LABELED PROTEINS

被引:61
作者
CLOWES, RT
BOUCHER, W
HARDMAN, CH
DOMAILLE, PJ
LAUE, ED
机构
[1] UNIV CAMBRIDGE,DEPT BIOCHEM,CAMBRIDGE CTR MOLEC RECOGNIT,TENNIS COURT RD,CAMBRIDGE CB2 1QW,ENGLAND
[2] DUPONT MERCK PHARMACEUT CO,WILMINGTON,DE 19880
关键词
4D NMR; RESONANCE ASSIGNMENT; SIDECHAIN/BACKBONE NUCLEI; LARGER PROTEINS; ISOTOPIC LABELING;
D O I
10.1007/BF00212520
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We recently proposed a novel four-dimensional (4D) NMR strategy for the assignment of backbone nuclei in spectra of C-13/N-15-labelled proteins (Boucher et al. (1992) J. Am. Chem. Soc., 114, 2262-2264 and J. Biomol. NMR, 2, 631-637). In this paper we extend this approach with a new constant time 4D HCC(CO)NNH experiment that also correlates the chemical shifts of the aliphatic sidechain (H-1 and C-13) and backbone (H-1, C-13alpha, and N-15) nuclei. It separates the sidechain resonances, which may heavily overlap in spectra of proteins with large numbers of similar residues, according to the backbone nitrogen and amide proton chemical shifts. When used in conjunction with a 4D HCANNH or HNCAHA experiment it allows, in principle, complete assignment of aliphatic sidechain and backbone resonances with just two 4D NMR experiments.
引用
收藏
页码:349 / 354
页数:6
相关论文
共 29 条
[1]   REMOVAL OF F1-BASE-LINE DISTORTION AND OPTIMIZATION OF FOLDING IN MULTIDIMENSIONAL NMR-SPECTRA [J].
BAX, A ;
IKURA, M ;
KAY, LE ;
ZHU, G .
JOURNAL OF MAGNETIC RESONANCE, 1991, 91 (01) :174-178
[2]   H-1-H-1 CORRELATION VIA ISOTROPIC MIXING OF C-13 MAGNETIZATION, A NEW 3-DIMENSIONAL APPROACH FOR ASSIGNING H-1 AND C-13 SPECTRA OF C-13-ENRICHED PROTEINS [J].
BAX, A ;
CLORE, GM ;
GRONENBORN, AM .
JOURNAL OF MAGNETIC RESONANCE, 1990, 88 (02) :425-431
[3]   PRACTICAL ASPECTS OF PROTON CARBON CARBON PROTON 3-DIMENSIONAL CORRELATION SPECTROSCOPY OF C-13-LABELED PROTEINS [J].
BAX, A ;
CLORE, GM ;
DRISCOLL, PC ;
GRONENBORN, AM ;
IKURA, M ;
KAY, LE .
JOURNAL OF MAGNETIC RESONANCE, 1990, 87 (03) :620-627
[4]  
BOCHER W, 1992, J BIOMOL NMR, V2, P631
[5]   4-DIMENSIONAL HETERONUCLEAR TRIPLE RESONANCE NMR METHODS FOR THE ASSIGNMENT OF BACKBONE NUCLEI IN PROTEINS [J].
BOUCHER, W ;
LAUE, ED ;
CAMPBELLBURK, S ;
DOMAILLE, PJ .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (06) :2262-2264
[6]  
BOUCHER W, 1991, NATO ADV SCI I A-LIF, V225, P87
[7]   NET POLARIZATION TRANSFER VIA A J-ORDERED STATE FOR SIGNAL ENHANCEMENT OF LOW-SENSITIVITY NUCLEI [J].
BURUM, DP ;
ERNST, RR .
JOURNAL OF MAGNETIC RESONANCE, 1980, 39 (01) :163-168
[8]   4-DIMENSIONAL C-13/C-13-EDITED NUCLEAR OVERHAUSER ENHANCEMENT SPECTROSCOPY OF A PROTEIN IN SOLUTION - APPLICATION TO INTERLEUKIN 1-BETA [J].
CLORE, GM ;
KAY, LE ;
BAX, A ;
GRONENBORN, AM .
BIOCHEMISTRY, 1991, 30 (01) :12-18
[9]   2D AND 3D NMR-SPECTROSCOPY EMPLOYING C-13-C-13 MAGNETIZATION TRANSFER BY ISOTROPIC MIXING - SPIN SYSTEM-IDENTIFICATION IN LARGE PROTEINS [J].
FESIK, SW ;
EATON, HL ;
OLEJNICZAK, ET ;
ZUIDERWEG, ERP ;
MCINTOSH, LP ;
DAHLQUIST, FW .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1990, 112 (02) :886-888
[10]   CORRELATING BACKBONE AMIDE AND SIDE-CHAIN RESONANCES IN LARGER PROTEINS BY MULTIPLE RELAYED TRIPLE RESONANCE NMR [J].
GRZESIEK, S ;
BAX, A .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (16) :6291-6293