EFFECTS OF GLYCOSYLATION ON PROTEIN-STRUCTURE AND DYNAMICS IN RIBONUCLEASE-B AND SOME OF ITS INDIVIDUAL GLYCOFORMS

被引:91
作者
JOAO, HC [1 ]
DWEK, RA [1 ]
机构
[1] UNIV OXFORD,DEPT BIOCHEM,INST GLYCOBIOL,GLYCOBIOL UNIT,S PARKS RD,OXFORD OX1 3QU,ENGLAND
来源
EUROPEAN JOURNAL OF BIOCHEMISTRY | 1993年 / 218卷 / 01期
关键词
D O I
10.1111/j.1432-1033.1993.tb18370.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In an attempt to elucidate the role of carbohydrates on protein structure and dynamics in glycoproteins, ribonuclease B (RNase B), containing a single glycosylation site at Asn34, has been investigated and compared with the enzyme in the unglycosylated form (RNase A). RNase B consists of five glycoforms: Man5GlcNAc2, Man6GlcNAc2, Man7GlcNAc2, Man8GlcNAc2 and Man9GlcNAc2 (Man5-9GlcNAc2). The individual glycoforms Man1GlcNAc2 (synthetic) and Man5GlcNAc2 of RNase B have been studied to ascertain any specific effects of the different oligosaccharides. NMR measurement of amide-proton/deuterium exchange rates shows that glycosylation of the enzyme leads to the protection of amide-proton resonances from solvent exchange for a large number of residues, both in the vicinity of the glycosylation site (e.g. residues 29-34 and 35) and remote from it (e.g. residues 57-61 and 75-76). In addition, residues 10-13, 32, 34 and 35, which are observed to be protected from exchange as a result of glycosylation in the individual glycoforms Man1GlcNAc2-RNase and Man5GlcNAC2-RNase (when compared with RNase A) are less protected in RNase B. This additional protection in the glycoforms Man1GlcNAc2-RNase and Man5GlcNAc2-RNase may arise from steric hindrance between the oligosaccharide and protein reducing solvent accessibility. The rates of solvent exchange of amide protons for residues 10-13, 32, 34 and 35 are dependent on the oligosaccharide moiety. The average amide-proton/deuterium exchange rate in Man6-9Glc-NAc2-ribonucleases for residues 10-13 and 35 is approximately three times greater than Man5GlcNAc2-ribonuclease while for residues 32 and 34 it is approximately 7-11 times greater. CD analysis of RNase A and RNase B revealed the carbohydrate moiety to have a small stabilizing effect (approximately 5 kJ/mol) on the protein.
引用
收藏
页码:239 / 244
页数:6
相关论文
共 32 条
[1]  
ARAKAWA T, 1985, METHOD ENZYMOL, V114, P49
[2]   MLEV-17-BASED TWO-DIMENSIONAL HOMONUCLEAR MAGNETIZATION TRANSFER SPECTROSCOPY [J].
BAX, A ;
DAVIS, DG .
JOURNAL OF MAGNETIC RESONANCE, 1985, 65 (02) :355-360
[3]  
BERMAN E, 1981, J BIOL CHEM, V256, P3853
[4]   TOWARD COMPLETE H-1-NMR SPECTRA IN PROTEINS [J].
BROWN, SC ;
WEBER, PL ;
MUELLER, L .
JOURNAL OF MAGNETIC RESONANCE, 1988, 77 (01) :166-169
[5]   STRUCTURE OF RIBONUCLEASE AT 25 ANGSTROM RESOLUTION [J].
CARLISLE, CH ;
PALMER, RA ;
MAZUMDAR, SK ;
GORINSKY, BA ;
YEATES, DGR .
JOURNAL OF MOLECULAR BIOLOGY, 1974, 85 (01) :1-&
[6]   ON-LINE COMPUTER-ASSISTED ANALYSIS OF 220 MHZ NMR DATA OF PROTEIN IMIDAZOLE RESONANCES [J].
COHEN, JS ;
SHRAGER, RI ;
MCNEEL, M ;
SCHECHTER, AN .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1970, 40 (01) :144-+
[7]  
ELBEIN AD, 1987, METHOD ENZYMOL, V138, P661
[8]   USE OF GLASS ELECTRODES TO MEASURE ACIDITIES IN DEUTERIUM OXIDE [J].
GLASOE, PK ;
LONG, FA .
JOURNAL OF PHYSICAL CHEMISTRY, 1960, 64 (01) :188-190
[9]  
GOOCHEE FC, 1992, FRONTIERS BIOPROCESS, V2, P199
[10]  
GRAFL R, 1987, J BIOL CHEM, V262, P10624