DETECTION OF A FUNCTIONAL PROMOTER ENHANCER IN AN INTRON-LESS HUMAN GENE ENCODING A GLUTAMINE SYNTHETASE-LIKE ENZYME

被引:29
作者
CHAKRABARTI, R
MCCRACKEN, JB
CHAKRABARTI, D
SOUBA, WW
机构
[1] UNIV FLORIDA,DEPT SURG,GAINESVILLE,FL 32610
[2] UNIV FLORIDA,DEPT BIOCHEM & MOLEC BIOL,GAINESVILLE,FL 32610
[3] UNIV FLORIDA,INTERDISCIPLINARY CTR BIOTECHNOL RES,GAINESVILLE,FL 32610
[4] MASSACHUSETTS GEN HOSP,DEPT SURG,DIV SURG ONCOL,BOSTON,MA 02146
关键词
TRANSCRIPTION; PSEUDOGENE; NUCLEOTIDE SEQUENCE; REGULATORY ELEMENT; TRANSCRIPT;
D O I
10.1016/0378-1119(94)00751-D
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
A human genomic clone, Psi GS, containing an intron-less glutamine synthetase (GS)-encoding pseudogene, was isolated by screening a human library, A sequence of 3004 bp, containing the GS coding region and both the 5' and 3' flanking sequences, was identified that exhibits all the characteristics of a processed pseudogene. The coding region shows 93% identity with the human GS cDNA (hGS) sequence and contains two frame-shifts and two termination codons. The coding sequence is flanked by a 9-bp AT repeat and a putative polyadenylation site, AATAAA, at the 3' end. Primer extension analysis and S1 nuclease mapping showed a transcription start point (tsp) 62 bp upstream from the start codon indicating a shorter untranslated region than hGS. Transfection of HeLa cells with cat constructs containing portions of the 5' flanking sequence showed the presence of a functional promoter/enhancer within 200 bp of the tsp, independent of its orientation.
引用
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页码:163 / 169
页数:7
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