SRP-RNA SEQUENCE ALIGNMENT AND SECONDARY STRUCTURE

被引:172
作者
LARSEN, N
ZWIEB, C
机构
[1] UNIV TEXAS, HLTH SCI CTR, DEPT MOLEC BIOL, POB 2003, TYLER, TX 75710 USA
[2] AARHUS UNIV, INST CHEM, DEPT BIOSTRUCT CHEM, DK-8000 AARHUS, DENMARK
关键词
D O I
10.1093/nar/19.2.209
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The secondary structures of the RNAs from the signal recognition particle, termed SRP-RNA, were derived buy comparative analyses of an alignment of 39 sequences. The models are minimal in that only base pairs are included for which there is comparative evidence. The structures represent refinements of earlier version and include a new short helix.
引用
收藏
页码:209 / 215
页数:7
相关论文
共 47 条
[1]  
ANDERSEN A, 1986, STRUCTURE DYNAMICS R
[2]   EVIDENCE FOR AN EXTENDED 7SL RNA STRUCTURE IN THE SIGNAL RECOGNITION PARTICLE [J].
ANDREWS, DW ;
WALTER, P ;
OTTENSMEYER, FP .
EMBO JOURNAL, 1987, 6 (11) :3471-3477
[3]   IDENTIFICATION OF AN ESSENTIAL SCHIZOSACCHAROMYCES-POMBE RNA HOMOLOGOUS TO THE 7SL COMPONENT OF SIGNAL RECOGNITION PARTICLE [J].
BRENNWALD, P ;
LIAO, XB ;
HOLM, K ;
PORTER, G ;
WISE, JA .
MOLECULAR AND CELLULAR BIOLOGY, 1988, 8 (04) :1580-1590
[4]   TIME OF ACTION OF 4-5-S RNA IN ESCHERICHIA-COLI TRANSLATION [J].
BROWN, S .
JOURNAL OF MOLECULAR BIOLOGY, 1989, 209 (01) :79-90
[5]   GENETIC SELECTION AND DNA-SEQUENCES OF 4.5S RNA HOMOLOGS [J].
BROWN, S ;
THON, G ;
TOLENTINO, E .
JOURNAL OF BACTERIOLOGY, 1989, 171 (12) :6517-6520
[6]   DIVERSITY OF 7-SL RNA FROM THE SIGNAL RECOGNITION PARTICLE OF MAIZE ENDOSPERM [J].
CAMPOS, N ;
PALAU, J ;
ZWIEB, C .
NUCLEIC ACIDS RESEARCH, 1989, 17 (04) :1573-1588
[7]  
EGEBJERG J, 1990, RIBOSOME, P168
[8]   5S-RNA SECONDARY STRUCTURE [J].
FOX, GE ;
WOESE, CR .
NATURE, 1975, 256 (5517) :505-507
[9]   THE ORGANIZATION OF THE 7SL RNA IN THE SIGNAL RECOGNITION PARTICLE [J].
GUNDELFINGER, ED ;
KRAUSE, E ;
MELLI, M ;
DOBBERSTEIN, B .
NUCLEIC ACIDS RESEARCH, 1983, 11 (21) :7363-7374
[10]   STRUCTURE AND EVOLUTION OF THE 7SL-RNA COMPONENT OF THE SIGNAL RECOGNITION PARTICLE [J].
GUNDELFINGER, ED ;
DICARLO, M ;
ZOPF, D ;
MELLI, M .
EMBO JOURNAL, 1984, 3 (10) :2325-2332