SEARCHING FOR CONFORMERS OF 9-RING TO 12-RING HYDROCARBONS ON THE MM2 AND MM3 ENERGY SURFACES - STOCHASTIC SEARCH FOR INTERCONVERSION PATHWAYS

被引:77
作者
SAUNDERS, M
机构
[1] Yale University, New Haven, Connecticut
关键词
CONFORMATIONAL SPACE; MOLECULAR MECHANICS; GLOBAL MINIMUM; FORCE-FIELD; CYCLONONANE;
D O I
10.1002/jcc.540120602
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The stochastic search method was employed to find as many conformers on the MM2 and MM3 energy surfaces as possible for cyclic saturated hydrocarbons with ring sizes from 9 through 12. The number found was 8 MM2 (8 MM3) for 9 rings, 18 MM2 (16 MM3) for 10 rings, 40 MM2 (29 MM3) for 11 rings, and 111 MM2 (90 MM3) for 12 rings. A measure of similarity between pairs of conformers of a compound, called conformational distance, is described. It was used to correlate similar MM2 and MM3 conformers. It was discovered that some conformers on each energy surface are not close to minima on the other surface in rings larger than 9. On refinement with the other optimizer, they changed considerably - going downhill to other previously found minima on the other energy surface or (in a few cases) going to minima which had not been found by direct searches. Conformational distance was also employed as an indication of which pairs of MM2 (or MM3) conformers are likely to interconvert rapidly. A new stochastic procedure of using small kicks was used to search for the most likely interconversion processes among the conformers. There is fairly good agreement between the most facile pathways located by it and unusually short conformational distances. Several additional 12-ring conformers (not found with previous methods) were located through application of this small kick procedure.
引用
收藏
页码:645 / 663
页数:19
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