A CHROMOSOME-13-SPECIFIC HUMAN SATELLITE-I DNA SUBFAMILY WITH MINOR PRESENCE ON CHROMOSOME-21 - FURTHER-STUDIES ON ROBERTSONIAN TRANSLOCATIONS

被引:36
作者
KALITSIS, P
EARLE, E
VISSEL, B
SHAFFER, LG
CHOO, KHA
机构
[1] ROYAL CHILDRENS HOSP,MURDOCH INST RES BIRTH DEFECTS,PARKVILLE,VIC 3052,AUSTRALIA
[2] BAYLOR COLL MED,INST MOLEC GENET,HOUSTON,TX 77030
关键词
D O I
10.1006/geno.1993.1147
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
We describe a new human satellite I DNA subfamily (pTRI-6) which is composed of 72 copies of monomeric repeating units of 42 basepairs (bp). These repeating units are tandemly organized into a higher order structure of 2.97 kilobases (kb). Sequencing of this DNA revealed base substitutions, deletions and insertions, and an overall conservation of 85% among the monomers. The sequence has a high AT content of 77%. Under low-stringency in situ hybridization conditions, satellite I is found on the pericentric regions of chromosomes 3 and 4 and on all the acrocentric chromosomes. On the acrocentric chromosomes, satellite I is further detected on the distal p13 region. Analysis of somatic cell hybrids under high stringency indicates the presence of the pTRI-6 subfamily predominantly on chromosome 13. Chromosome 21 shows a 50- to lOO-fold reduced amount of this subfamily and the presence of other sequences closely related to pTRI-6. Investigation of a group of 11 human t(14q21q) Robertsonian translocations revealed the retention of satellite I DNA around the breakpoints in all cases. These results extend our understanding of these translocations and of the general structural organization of the cen-pter regions of the acrocentric chromosomes. © 1993 by Academic Press, Inc.
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页码:104 / 112
页数:9
相关论文
共 33 条
[1]   CHROMOSOMAL LOCATION BY INSITU HYBRIDIZATION OF THE HUMAN SAU3A FAMILY OF DNA REPEATS [J].
AGRESTI, A ;
RAINALDI, G ;
LOBBIANI, A ;
MAGNANI, I ;
DILERNIA, R ;
MENEVERI, R ;
SICCARDI, AG ;
GINELLI, E .
HUMAN GENETICS, 1987, 75 (04) :326-332
[2]   IDENTIFICATION OF 2 DISTINCT SUBFAMILIES OF ALPHA-SATELLITE DNA THAT ARE HIGHLY SPECIFIC FOR HUMAN CHROMOSOME-15 [J].
CHOO, KH ;
EARLE, E ;
VISSEL, B ;
FILBY, RG .
GENOMICS, 1990, 7 (02) :143-151
[3]   HOMOLOGOUS ALPHA-SATELLITE SEQUENCES ON HUMAN ACROCENTRIC CHROMOSOMES WITH SELECTIVITY FOR CHROMOSOMES 13, 14 AND 21 - IMPLICATIONS FOR RECOMBINATION BETWEEN NONHOMOLOGUES AND ROBERTSONIAN TRANSLOCATIONS [J].
CHOO, KH ;
VISSEL, B ;
BROWN, R ;
FILBY, RG ;
EARLE, E .
NUCLEIC ACIDS RESEARCH, 1988, 16 (04) :1273-1283
[4]   A SURVEY OF THE GENOMIC DISTRIBUTION OF ALPHA-SATELLITE DNA ON ALL THE HUMAN-CHROMOSOMES, AND DERIVATION OF A NEW CONSENSUS SEQUENCE [J].
CHOO, KH ;
VISSEL, B ;
NAGY, A ;
EARLE, E ;
KALITSIS, P .
NUCLEIC ACIDS RESEARCH, 1991, 19 (06) :1179-1182
[5]   A HOMOLOGOUS SUBFAMILY OF SATELLITE-III DNA ON HUMAN CHROMOSOME-14 AND CHROMOSOME-22 [J].
CHOO, KH ;
EARLE, E ;
MCQUILLAN, C .
NUCLEIC ACIDS RESEARCH, 1990, 18 (19) :5641-5648
[6]  
CHOO KH, 1991, METHODS MOL BIOL, V9, pCH21
[7]  
CHOO KH, 1990, MOL BIOL MED, V7, P487
[8]  
CHOO KHA, 1992, AM J HUM GENET, V50, P706
[9]  
EARLE E, 1992, AM J HUM GENET, V50, P717
[10]  
FERGUSONSMITH MA, 1967, LANCET, V1, P1156