POLYADENYLYLATION HELPS REGULATE MESSENGER-RNA DECAY IN ESCHERICHIA-COLI

被引:210
作者
OHARA, EB [1 ]
CHEKANOVA, JA [1 ]
INGLE, CA [1 ]
KUSHNER, ZR [1 ]
PETERS, E [1 ]
KUSHNER, SR [1 ]
机构
[1] UNIV GEORGIA,DEPT GENET,ATHENS,GA 30602
关键词
POLY(A) POLYMERASE; TRXA; OMPA; LPP; MESSENGER-RNA HALF-LIVES;
D O I
10.1073/pnas.92.6.1807
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
As part of our genetic analysis of mRNA decay in Escherichia coli K-12, we examined the effect of the pcnB gene [encoding poly(A) polymerase I] on message stability. Eliminating poly(A) polymerase I (Delta pcnB) dramatically stabilized the lpp, ompA, and trxA transcripts. The half lives of individual mRNAs were increased in both a Delta pcnB single mutant and a Delta pcnB pnp-7 rnb-500 rne-1 multiple mutant. We also found mRNA decay intermediates in Delta pcnB mutants that were not detected in control strains, By end-labeling total E. coli RNA with [P-32]pCp and T4 RNA ligase and then digesting the RNA with RNase A and T-1, we showed that many RNAs in a wild-type strain contained poly(A) tails ranging from 10 nt to >50 nt long. When polynucleotide phosphorylase, RNase II, and RNase E were absent, the length (>100 nt) and number (10- to 20-fold) of the poly(A) tails increased. After transcription initiation was stopped with rifampicin, polyadenylylation apparently continued. Deleting the structural gene for poly(A) polymerase I (pcnB) reduced the amount of 3'-terminal poly(A) sequences by >90%. We propose a model for the role of polyadenylylation in mRNA decay,
引用
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页码:1807 / 1811
页数:5
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