AMINO-ACID-SEQUENCE OF FIBROLASE, A DIRECT-ACTING FIBRINOLYTIC ENZYME FROM AGKISTRODON-CONTORTRIX-CONTORTRIX VENOM

被引:88
作者
RANDOLPH, A
CHAMBERLAIN, SH
CHU, HLC
RETZIOS, AD
MARKLAND, FS
MASIARZ, FR
机构
[1] UNIV SO CALIF,SCH MED,CTR COMPREHENS CANC,LOS ANGELES,CA 90033
[2] UNIV SO CALIF,SCH MED,DEPT BIOCHEM,LOS ANGELES,CA 90033
关键词
AMINO ACID SEQUENCE; SECONDARY STRUCTURE; SNAKE VENOM FIBROLASE;
D O I
10.1002/pro.5560010505
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The complete amino acid sequence of fibrolase, a fibrinolytic enzyme from southern copperhead (Agkistrodon contortrix contortrix) venom, has been determined. This is the first report of the sequence of a direct-acting, nonhemorrhagic fibrinolytic enzyme found in snake venom. The majority of the sequence was established by automated Edman degradation of overlapping peptides generated by a variety of selective cleavage procedures. The amino-terminus is blocked by a cyclized glutamine (pyroglutamic acid) residue, and the sequence of this region of the molecule was determined by mass spectrometry. Fibrolase is composed of 203 residues in a single polypeptide chain with a molecular weight of 22,891, as determined by the sequence. Its sequence is homologous to the sequence of the hemorrhagic toxin Ht-d of Crotalus atrox venom and with the sequences of two metalloproteinases from Trimeresurus flavoviridis venom. Microheterogeneity in the sequence was found at both the amino-terminus and at residues 189 and 192. All six cysteine residues in fibrolase are involved in disulfide bonds. A disulfide bond between cysteine-118 and cysteine-198 has been established and bonds between cysteines-158/165 and between cysteines-160/192 are inferred from the homology to Ht-d. Secondary structure prediction reveals a very low percentage of alpha-helix (4%), but much greater beta-structure (39.5%). Analysis of the sequence reveals the absence of asparagine-linked glycosylation sites defined by the consensus sequence: asparagine-X-serine/threonine.
引用
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页码:590 / 600
页数:11
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