MOLECULAR CHARACTERIZATION OF CYSTIC-FIBROSIS - 16 NOVEL MUTATIONS IDENTIFIED BY ANALYSIS OF THE WHOLE CYSTIC-FIBROSIS CONDUCTANCE TRANSMEMBRANE REGULATOR (CFTR) CODING REGIONS AND SPLICE SITE JUNCTIONS

被引:259
作者
FANEN, P [1 ]
GHANEM, N [1 ]
VIDAUD, M [1 ]
BESMOND, C [1 ]
MARTIN, J [1 ]
COSTES, B [1 ]
PLASSA, F [1 ]
GOOSSENS, M [1 ]
机构
[1] HOP HENRI MONDOR,INSERM,U91,GENET MOLEC LAB,F-94010 CRETEIL,FRANCE
关键词
D O I
10.1016/0888-7543(92)90152-I
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The spectrum of cystic fibrosis (CF) mutations was determined in 105 patients by using denaturing gradiert gel electrophoresis to screen the entire coding regiors and adjacent cystic fibrosis transmembrane conductance regulator (CFTR) gene sequences. The nucleotide substitutions detected included 16 novel mutations, 11 previously described defects, and 11 nucleotide sequence polymorphisms. Among the novel mutations, 6 were of the missense type, 4 were nonsense mutation, 4 were frameshift defects, and 2 affected mRNA splicing. The mutations involved all the CFTR domains, including the R domain. Of the 61 non-ΔF508 CF chromosomes studied, mutations were found on 36 (59%), raising the proportion of CF alleles characterized in our patient cohort to 88%. Given the efficacy of the screening method used, the remaining uncharacterized mutations probably lie in DNA sequences outside the regions studied, e.g., upstreampromoter sequences, the large introns, or putative regulatory regions. Our results further document the highly heterogeneous nature of CF mutations and provide the information required for DNA-based genetic testing. © 1992.
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收藏
页码:770 / 776
页数:7
相关论文
共 27 条
  • [1] DEMONSTRATION THAT CFTR IS A CHLORIDE CHANNEL BY ALTERATION OF ITS ANION SELECTIVITY
    ANDERSON, MP
    GREGORY, RJ
    THOMPSON, S
    SOUZA, DW
    PAUL, S
    MULLIGAN, RC
    SMITH, AE
    WELSH, MJ
    [J]. SCIENCE, 1991, 253 (5016) : 202 - 205
  • [2] MUTATIONS IN THE CATALYTIC DOMAIN OF HUMAN COAGULATION FACTOR-IX - RAPID CHARACTERIZATION BY DIRECT GENOMIC SEQUENCING OF DNA FRAGMENTS DISPLAYING AN ALTERED MELTING BEHAVIOR
    ATTREE, O
    VIDAUD, D
    VIDAUD, M
    AMSELEM, S
    LAVERGNE, JM
    GOOSSENS, M
    [J]. GENOMICS, 1989, 4 (03) : 266 - 272
  • [3] CHEHAB FF, 1991, AM J HUM GENET, V48, P223
  • [4] PHOSPHORYLATION OF THE R-DOMAIN BY CAMP-DEPENDENT PROTEIN-KINASE REGULATES THE CFTR CHLORIDE CHANNEL
    CHENG, SH
    RICH, DP
    MARSHALL, J
    GREGORY, RJ
    WELSH, MJ
    SMITH, AE
    [J]. CELL, 1991, 66 (05) : 1027 - 1036
  • [5] A CLUSTER OF CYSTIC-FIBROSIS MUTATIONS IN THE 1ST NUCLEOTIDE-BINDING FOLD OF THE CYSTIC-FIBROSIS CONDUCTANCE REGULATOR PROTEIN
    CUTTING, GR
    KASCH, LM
    ROSENSTEIN, BJ
    ZIELENSKI, J
    TSUI, LC
    ANTONARAKIS, SE
    KAZAZIAN, HH
    [J]. NATURE, 1990, 346 (6282) : 366 - 369
  • [6] GASPARINI P, 1991, HUM GENET, V86, P625
  • [7] THE SEARCH FOR SOUTH EUROPEAN CYSTIC-FIBROSIS MUTATIONS - IDENTIFICATION OF 2 NEW MUTATIONS, 4 VARIANTS, AND INTRONIC SEQUENCES
    GASPARINI, P
    NUNES, V
    SAVOIA, A
    DOGNINI, M
    MORRAL, N
    GAONA, A
    BONIZZATO, A
    CHILLON, M
    SANGIUOLO, F
    NOVELLI, G
    DALLAPICCOLA, B
    PIGNATTI, PF
    ESTIVILL, X
    [J]. GENOMICS, 1991, 10 (01) : 193 - 200
  • [8] GOOSSENS M, 1990, ANN NY ACAD SCI, V612, P74
  • [9] A 3' SPLICE SITE CONSENSUS SEQUENCE MUTATION IN THE CYSTIC-FIBROSIS GENE
    GUILLERMIT, H
    FANEN, P
    FEREC, C
    [J]. HUMAN GENETICS, 1990, 85 (04) : 450 - 453
  • [10] GENERATION OF SINGLE-STRANDED-DNA BY THE POLYMERASE CHAIN-REACTION AND ITS APPLICATION TO DIRECT SEQUENCING OF THE HLA-DQA LOCUS
    GYLLENSTEN, UB
    ERLICH, HA
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1988, 85 (20) : 7652 - 7656