LOCALLY OPTIMAL SUBALIGNMENTS USING NONLINEAR SIMILARITY FUNCTIONS

被引：18

作者：

ALTSCHUL, SF ^{[1
]}

ERICKSON, BW ^{[1
]}

机构：

[1] MIT,DEPT APPL MATH,CAMBRIDGE,MA 02139

来源：

BULLETIN OF MATHEMATICAL BIOLOGY | 1986年 / 48卷 / 5-6期

关键词：

D O I：

10.1007/BF02462328

中图分类号：

Q [生物科学];

学科分类号：

07 ; 0710 ; 09 ;

摘要：

引用

页码：633 / 660

页数：28

共 18 条

[1] A NONLINEAR MEASURE OF SUBALIGNMENT SIMILARITY AND ITS SIGNIFICANCE LEVELS [J].

ALTSCHUL, SF ;

ERICKSON, BW .

BULLETIN OF MATHEMATICAL BIOLOGY, 1986, 48 (5-6) :617-632

[2] OPTIMAL SEQUENCE ALIGNMENT USING AFFINE GAP COSTS [J].

ALTSCHUL, SF ;

ERICKSON, BW .

BULLETIN OF MATHEMATICAL BIOLOGY, 1986, 48 (5-6) :603-616

[3] INTERNAL DUPLICATION IN HUMAN ALPHA-1-INTERFERON AND BETA-1-INTERFERON [J].

ERICKSON, BW ;

MAY, LT ;

SEHGAL, PB .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1984, 81 (22) :7171-7175

[4]

ERICKSON BW, 1983, TIME WARPS STRING ED, P55

[5] OPTIMAL SEQUENCE ALIGNMENTS [J].

FITCH, WM ;

SMITH, TF .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1983, 80 (05) :1382-1386

[6] PATTERN-RECOGNITION IN NUCLEIC-ACID SEQUENCES .1. A GENERAL-METHOD FOR FINDING LOCAL HOMOLOGIES AND SYMMETRIES [J].

GOAD, WB ;

KANEHISA, MI .

NUCLEIC ACIDS RESEARCH, 1982, 10 (01) :247-263

[7] AN IMPROVED ALGORITHM FOR MATCHING BIOLOGICAL SEQUENCES [J].

GOTOH, O .

JOURNAL OF MOLECULAR BIOLOGY, 1982, 162 (03) :705-708

[8] A GENERAL METHOD APPLICABLE TO SEARCH FOR SIMILARITIES IN AMINO ACID SEQUENCE OF 2 PROTEINS [J].

NEEDLEMAN, SB ;

WUNSCH, CD .

JOURNAL OF MOLECULAR BIOLOGY, 1970, 48 (03) :443-+

[9] ON THE STATISTICAL ASSESSMENT OF SIMILARITIES IN DNA-SEQUENCES [J].

REICH, JG ;

DRABSCH, H ;

DAUMLER, A .

NUCLEIC ACIDS RESEARCH, 1984, 12 (13) :5529-5543

[10]

SCHWARTZ RM, 1978, ATLAS PROTEIN SEQ S3, V5, P345

← 1 2 →