MODIFIED RNA SEQUENCE POOLS FOR IN-VITRO SELECTION

被引:154
作者
LIN, Y [1 ]
QIU, Q [1 ]
GILL, SC [1 ]
JAYASENA, SD [1 ]
机构
[1] NEXAGEN INC,BOULDER,CO 80301
关键词
D O I
10.1093/nar/22.24.5229
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We report the use of modified RNA, in which the 2'-OH group of pyrimidines is replaced by a 2'-amino (2'-NH2) group to identify high affinity ligands specific for human neutrophil elastase (HNE) by in vitro selection. Compared to unmodified RNA the P'-NH2-modified RNA ligands show enhanced stability in human serum and urine. Use of RNase T1 cleavage data in the presence of K+ and Li+ ions suggests that the modified RNA ligands selected for HNE form an intermolecular G-quartet structure.
引用
收藏
页码:5229 / 5234
页数:6
相关论文
共 43 条
[1]   2'-FLUORO-2'-DEOXYNUCLEOSIDE AND 2'-AMINO-2'-DEOXYNUCLEOSIDE 5'-TRIPHOSPHATES AS SUBSTRATES FOR T7 RNA-POLYMERASE [J].
AURUP, H ;
WILLIAMS, DM ;
ECKSTEIN, F .
BIOCHEMISTRY, 1992, 31 (40) :9636-9641
[2]  
BARRACLOUGH DR, 1978, GEOMAGNETIC B I GEOL, V8, P1
[3]   HIV-1 REV REGULATION INVOLVES RECOGNITION OF NON-WATSON-CRICK BASE-PAIRS IN VIRAL-RNA [J].
BARTEL, DP ;
ZAPP, ML ;
GREEN, MR ;
SZOSTAK, JW .
CELL, 1991, 67 (03) :529-536
[4]   ISOLATION OF NEW RIBOZYMES FROM A LARGE POOL OF RANDOM SEQUENCES [J].
BARTEL, DP ;
SZOSTAK, JW .
SCIENCE, 1993, 261 (5127) :1411-1418
[5]   DIRECTED EVOLUTION OF AN RNA ENZYME [J].
BEAUDRY, AA ;
JOYCE, GF .
SCIENCE, 1992, 257 (5070) :635-641
[6]   SELECTION OF SINGLE-STRANDED-DNA MOLECULES THAT BIND AND INHIBIT HUMAN THROMBIN [J].
BOCK, LC ;
GRIFFIN, LC ;
LATHAM, JA ;
VERMAAS, EH ;
TOOLE, JJ .
NATURE, 1992, 355 (6360) :564-566
[7]   SOLUTION STRUCTURE OF AN UNUSUALLY STABLE RNA TETRAPLEX CONTAINING G-QUARTET AND U-QUARTET STRUCTURES [J].
CHEONG, CJ ;
MOORE, PB .
BIOCHEMISTRY, 1992, 31 (36) :8406-8414
[8]   3 SMALL RIBOOLIGONUCLEOTIDES WITH SPECIFIC ARGININE SITES [J].
CONNELL, GJ ;
ILLANGESEKARE, M ;
YARUS, M .
BIOCHEMISTRY, 1993, 32 (21) :5497-5502
[9]   INVITRO SELECTION OF RNA MOLECULES THAT BIND SPECIFIC LIGANDS [J].
ELLINGTON, AD ;
SZOSTAK, JW .
NATURE, 1990, 346 (6287) :818-822
[10]  
GOLD L, 1993, RNA WORLD, V19, P497