PENDANT-CAPPED PORPHYRINS .2. STRUCTURAL-ANALYSIS AND DYNAMICS OF THE BIPHENYL PENDANT-CAPPED PORPHYRIN MODEL OF CATALASE AND ITS FE(III) COMPLEX BY ONE-DIMENSIONAL AND 2-DIMENSIONAL H-1-NMR SPECTROSCOPY AND DISTANCE GEOMETRY MOLECULAR MODELING REFINEMENT

被引:10
作者
BLASKO, A [1 ]
GARCIA, B [1 ]
BRUICE, TC [1 ]
机构
[1] UNIV CALIF SANTA BARBARA,DEPT CHEM,SANTA BARBARA,CA 93106
关键词
D O I
10.1021/jo00073a037
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
The solution structure of a phenol pendant-capped porphyrin [(PHPCP)H-2] has been determined by two-dimensional NMR spectroscopy and Distance Geometry calculations. Sixteen internuclear distances have been obtained from rotating frame NOE (ROESY) experiments. The refined structure shows a spiral shape of the cap allowing a minimum exposure of the porphyrin core to solvent. Docking of Fe(III) into the solution structure of (PHPCP)H-2 shows that the phenolate oxygen moves 1.5 angstrom toward the porphyrin plane and the porphyrin ring flattens. The assignment of C-13 resonances for (PHPCP)H-2 (heteronuclear C-13-H-1 chemical shift correlation) and partial assignment of C-13 resonances for (PPCP)Fe(III) have been done. The C-13 T1 relaxation times and restrained molecular dynamics calculations for (PHPCP)H-2 show a rigid structure of the cap and a pulsing motion along the z-axis. The overall rotational coefficient was found to be 3.71 x 10(-10) s. A variable temperature study of H-1 resonances establishes a structural change of (PHPCP)H-2 between 27-28-degrees-C. Low-temperature study on (PHPCP)H-2 shows that the coalescence temperature of the beta'beta'' pyrrole protons is -40-degrees-C, while for the NH amide protons <-93-degrees-C. Molecular dynamics studies on (PHPCP)H-2 and (PPCP)Fe(III) shows a flexibility of the former and a rigidity of the latter.
引用
收藏
页码:5738 / 5747
页数:10
相关论文
共 24 条
[1]  
[Anonymous], 1971, CHRISTMAS CHRISTMAS
[2]  
BREITMAIER E, 1987, CARBON 13 NMR SPECTR, P163
[3]   CHARMM - A PROGRAM FOR MACROMOLECULAR ENERGY, MINIMIZATION, AND DYNAMICS CALCULATIONS [J].
BROOKS, BR ;
BRUCCOLERI, RE ;
OLAFSON, BD ;
STATES, DJ ;
SWAMINATHAN, S ;
KARPLUS, M .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1983, 4 (02) :187-217
[4]   NMR-SPECTROSCOPY OF COBALT(III) PORPHYRIN COMPLEXES .4. C-13 RELAXATION-TIMES AND INTRAMOLECULAR MOTION OF AXIAL N-METHYLIMIDAZOLE [J].
CASSIDEI, L ;
BANG, H ;
EDWARDS, JO ;
LAWLER, RG .
JOURNAL OF PHYSICAL CHEMISTRY, 1991, 95 (19) :7186-7188
[5]   SYSTEMATIC ELIMINATION OF RF PULSE DEFECT ERRORS IN FOURIER-TRANSFORM SPIN-LATTICE RELAXATION MEASUREMENTS [J].
CUTNELL, JD ;
BLEICH, HE ;
GLASEL, JA .
JOURNAL OF MAGNETIC RESONANCE, 1976, 21 (01) :43-46
[6]   RADIOFREQUENCY PULSE SEQUENCES WHICH COMPENSATE THEIR OWN IMPERFECTIONS [J].
FREEMAN, R ;
KEMPSELL, SP ;
LEVITT, MH .
JOURNAL OF MAGNETIC RESONANCE, 1980, 38 (03) :453-479
[7]   PENDANT-CAPPED PORPHYRINS .1. THE SYNTHESIS OF A BIPHENYL PENDANT-CAPPED IRON(III) PORPHYRIN MODEL OF CATALASE [J].
GARCIA, B ;
LEE, CH ;
BLASKO, A ;
BRUICE, TC .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1991, 113 (21) :8118-8126
[9]  
HAVEL TF, 1983, B MATH BIOL, V45, P665
[10]   STRUCTURAL STUDIES OF METALLOPORPHYRINS .6. C-13 RELAXATION-TIME, T1, MEASUREMENTS AND THE NATURE OF THE AXIAL N-METAL BOND IN SOME MACROCYCLIC COMPLEXES [J].
HUET, J ;
GAUDEMER, A .
ORGANIC MAGNETIC RESONANCE, 1981, 15 (04) :347-352