A NEW CHINESE ISOLATE OF HEPATITIS-E VIRUS - COMPARISON WITH STRAINS RECOVERED FROM DIFFERENT GEOGRAPHICAL REGIONS

被引:47
作者
YIN, SR
PURCELL, RH
EMERSON, SU
机构
[1] NIAID, INFECT DIS LAB, HEPATITIS VIRUSES SECT, BETHESDA, MD 20892 USA
[2] INST MICROBIOL & EPIDEMIOL, BEIJING, PEOPLES R CHINA
关键词
HEV GENOME; PCR; GENETIC HETEROGENEITY;
D O I
10.1007/BF01703432
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The full-length cDNA of a new Chinese strain (KS2-87) of Hepatitis E virus (HEV) has been constructed and sequenced. The 5' noncoding region of KS2-87 is 26 nucleotides in length, which is one nucleotide shorter than that of HEV (B1) (Burma) and 23 nucleotides longer than that of HEV (Mexico). Comparison of the nucleotide and amino acid sequences of KS2-87 with all other published HEV sequences showed that KS2-87 was closer to two other Chinese strains (CHT-88, CHT-87) and SAR-55 (Pakistan) than to HEV (B1) and HEV (B2) (Burma) or HEV (Mexico). Comparisons of partial sequences of genes encoding a nonstructural and a structural protein revealed the existence of genetically related groups of HEV within geographical regions, whereas larger nucleotide differences were seen among isolates that were more geographically and epidemiologically distant.
引用
收藏
页码:23 / 32
页数:10
相关论文
共 28 条
[1]   SEQUENCE AND GENE STRUCTURE OF THE HEPATITIS-E VIRUS ISOLATED FROM MYANMAR [J].
AYE, TT ;
UCHIDA, T ;
MA, XZ ;
IIDA, F ;
SHIKATA, T ;
ICHIKAWA, M ;
RIKIHISA, T ;
WIN, KM .
VIRUS GENES, 1993, 7 (01) :95-110
[2]   COMPLETE NUCLEOTIDE-SEQUENCE OF A HEPATITIS-E VIRUS ISOLATED FROM THE XINJIANG EPIDEMIC (1986-1988) OF CHINA [J].
AYE, TT ;
UCHIDA, T ;
MA, XZ ;
IIDA, F ;
SHIKATA, T ;
ZHUANG, H ;
WIN, KM .
NUCLEIC ACIDS RESEARCH, 1992, 20 (13) :3512-3512
[3]   THE SEQUENCE OF HEPATITIS-E VIRUS ISOLATED DIRECTLY FROM A SINGLE-SOURCE DURING AN OUTBREAK IN CHINA [J].
BI, SL ;
PURDY, MA ;
MCCAUSTLAND, KA ;
MARGOLIS, HS ;
BRADLEY, DW .
VIRUS RESEARCH, 1993, 28 (03) :233-247
[4]   ETIOLOGICAL AGENT OF ENTERICALLY TRANSMITTED NON-A-HEPATITIS, NON-B-HEPATITIS [J].
BRADLEY, D ;
ANDJAPARIDZE, A ;
COOK, EH ;
MCCAUSTLAND, K ;
BALAYAN, M ;
STETLER, H ;
VELAZQUEZ, O ;
ROBERTSON, B ;
HUMPHREY, C ;
KANE, M ;
WEISFUSE, I .
JOURNAL OF GENERAL VIROLOGY, 1988, 69 :731-738
[5]   ENTERICALLY TRANSMITTED NON-A, NON-B HEPATITIS - SERIAL PASSAGE OF DISEASE IN CYNOMOLGUS MACAQUES AND TAMARINS AND RECOVERY OF DISEASE-ASSOCIATED 27-NM TO 34-NM VIRUS-LIKE PARTICLES [J].
BRADLEY, DW ;
KRAWCZYNSKI, K ;
COOK, EH ;
MCCAUSTLAND, KA ;
HUMPHREY, CD ;
SPELBRING, JE ;
MYINT, H ;
MAYNARD, JE .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1987, 84 (17) :6277-6281
[6]  
CAO XY, 1991, INT CONGR SER, V895, P297
[7]   EPIDEMIC NON-A, NON-B HEPATITIS IN PATIENTS FROM PAKISTAN [J].
DECOCK, KM ;
BRADLEY, DW ;
SANDFORD, NL ;
GOVINDARAJAN, S ;
MAYNARD, JE ;
REDEKER, AG .
ANNALS OF INTERNAL MEDICINE, 1987, 106 (02) :227-230
[8]   CDNA CLONE OF HEPATITIS-A VIRUS ENCODING A VIRULENT VIRUS - INDUCTION OF VIRAL-HEPATITIS BY DIRECT NUCLEIC-ACID TRANSFECTION OF MARMOSETS [J].
EMERSON, SU ;
LEWIS, M ;
GOVINDARAJAN, S ;
SHAPIRO, M ;
MOSKAL, T ;
PURCELL, RH .
JOURNAL OF VIROLOGY, 1992, 66 (11) :6649-6654
[9]   2 RELATED SUPERFAMILIES OF PUTATIVE HELICASES INVOLVED IN REPLICATION, RECOMBINATION, REPAIR AND EXPRESSION OF DNA AND RNA GENOMES [J].
GORBALENYA, AE ;
KOONIN, EV ;
DONCHENKO, AP ;
BLINOV, VM .
NUCLEIC ACIDS RESEARCH, 1989, 17 (12) :4713-4730
[10]   REPORT OF A WORKSHOP - WATERBORNE NON-A, NON-B HEPATITIS [J].
GUST, ID ;
PURCELL, RH .
JOURNAL OF INFECTIOUS DISEASES, 1987, 156 (04) :630-635