PROTEINS WITH SELECTED SEQUENCES FOLD INTO UNIQUE NATIVE CONFORMATION

被引:374
作者
SHAKHNOVICH, EI
机构
[1] Harvard University, Department of Chemistry, Cambridge, MA 02138
关键词
D O I
10.1103/PhysRevLett.72.3907
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
We design sequences of 80-monomer model protein which provide very low energy in the target (''native'') structure. Then the designed sequence is subjected to lattice Monte Carlo simulation of folding. In all runs model protein folded from random coil to the unique native conformation, effectively ''solving'' the multiple minima problem. These results suggest that thermodynamically oriented selection of sequences which makes the native conformation a pronounced deep minimum of energy solves the problem of kinetic accessibility of this conformation as well.
引用
收藏
页码:3907 / 3910
页数:4
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