LARGE HUMAN YACS CONSTRUCTED IN A RAD52 STRAIN SHOW A REDUCED RATE OF CHIMERISM

被引:37
作者
HALDI, M
PERROT, V
SAUMIER, M
DESAI, T
COHEN, D
CHERIF, D
WARD, D
LANDER, ES
机构
[1] WHITEHEAD INST BIOMED RES,CAMBRIDGE CTR 9,CAMBRIDGE,MA 02142
[2] FDN JEAN DAUSSET,CTR ETUD POLYMORPHISME HUMAIN,F-75010 PARIS,FRANCE
[3] YALE UNIV,SCH MED,DEPT GENET,NEW HAVEN,CT 06520
[4] MIT,DEPT BIOL,CAMBRIDGE,MA 02139
关键词
D O I
10.1006/geno.1994.1656
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Current YAC libraries are plagued by a high frequency of chimeras-that is, clones containing fragments from multiple genomic regions. Chimeras are thought to arise largely through recombination in the yeast host cell. If so, the use of recombination-deficient yeast strains, such as rad52 mutants, might be expected to alleviate the problem. Here, we report the construction of megabase-sized human YACs in the rad52 strain MHY5201 and the determination of their rate of chimerism by fluorescence in situ hybridization analysis. Examination of 48 YACs showed a rate of chimerism of at most 8%, whereas YACs constructed in the wildtype host AB1380 showed a rate of about 50%. These results show that it is possible to significantly decrease the rate of YAC chimerism through the use of appropriate yeast host strains. (C) 1994 Academic Press, Inc.
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收藏
页码:478 / 484
页数:7
相关论文
共 27 条
[1]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[2]   AN EASY AND RAPID METHOD FOR THE DETECTION OF CHIMERIC YEAST ARTIFICIAL CHROMOSOME CLONES [J].
BANFI, S ;
LEDBETTER, SA ;
CHINAULT, AC ;
ZOGHBI, HY .
NUCLEIC ACIDS RESEARCH, 1992, 20 (07) :1814-1814
[3]   CHARACTERIZATION OF A YEAST ARTIFICIAL CHROMOSOME CONTIG SPANNING THE HUNTINGTONS-DISEASE GENE CANDIDATE REGION [J].
BATES, GP ;
VALDES, J ;
HUMMERICH, H ;
BAXENDALE, S ;
LEPASLIER, DL ;
MONACO, AP ;
TAGLE, D ;
MACDONALD, ME ;
ALTHERR, M ;
ROSS, M ;
BROWNSTEIN, BH ;
BENTLEY, D ;
WASMUTH, JJ ;
GUSELLA, JF ;
COHEN, D ;
COLLINS, F ;
LEHRACH, H .
NATURE GENETICS, 1992, 1 (03) :180-187
[4]   ISOLATION AND CHARACTERIZATION OF YEAST ARTIFICIAL CHROMOSOME CLONES LINKING THE HLA-B AND HLA-C LOCI [J].
BRONSON, SK ;
PEI, J ;
TAILLONMILLER, P ;
CHORNEY, MJ ;
GERAGHTY, DE ;
CHAPLIN, DD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1991, 88 (05) :1676-1680
[5]   CLONING OF LARGE SEGMENTS OF EXOGENOUS DNA INTO YEAST BY MEANS OF ARTIFICIAL CHROMOSOME VECTORS [J].
BURKE, DT ;
CARLE, GF ;
OLSON, MV .
SCIENCE, 1987, 236 (4803) :806-812
[6]   CONSTRUCTION OF A MOUSE YEAST ARTIFICIAL CHROMOSOME LIBRARY IN A RECOMBINATION-DEFICIENT STRAIN OF YEAST [J].
CHARTIER, FL ;
KEER, JT ;
SUTCLIFFE, MJ ;
HENRIQUES, DA ;
MILEHAM, P ;
BROWN, SDM .
NATURE GENETICS, 1992, 1 (02) :132-136
[7]   SEPARATION OF LARGE DNA-MOLECULES BY CONTOUR-CLAMPED HOMOGENEOUS ELECTRIC-FIELDS [J].
CHU, G ;
VOLLRATH, D ;
DAVIS, RW .
SCIENCE, 1986, 234 (4783) :1582-1585
[8]   CHARACTERIZATION OF NIGMS HUMAN RODENT SOMATIC-CELL HYBRID MAPPING PANEL-2 BY PCR [J].
DUBOIS, BL ;
NAYLOR, SL .
GENOMICS, 1993, 16 (02) :315-319
[9]   A TECHNIQUE FOR RADIOLABELING DNA RESTRICTION ENDONUCLEASE FRAGMENTS TO HIGH SPECIFIC ACTIVITY [J].
FEINBERG, AP ;
VOGELSTEIN, B .
ANALYTICAL BIOCHEMISTRY, 1983, 132 (01) :6-13
[10]   THE HUMAN Y-CHROMOSOME - OVERLAPPING DNA CLONES SPANNING THE EUCHROMATIC REGION [J].
FOOTE, S ;
VOLLRATH, D ;
HILTON, A ;
PAGE, DC .
SCIENCE, 1992, 258 (5079) :60-66