FLEMING-VIOT PROCESSES IN POPULATION-GENETICS

被引:136
作者
ETHIER, SN [1 ]
KURTZ, TG [1 ]
机构
[1] UNIV WISCONSIN, DEPT MATH, MADISON, WI 53706 USA
关键词
MEASURE-VALUED MARKOV CHAIN; MEASURE-VALUED DIFFUSION PROCESS; MARTINGALE PROBLEM; CONVERGENCE IN DISTRIBUTION; ERGODICITY; INFINITE PARTICLE SYSTEM; REVERSIBILITY; INFINITELY-MANY-NEUTRAL-ALLELES MODEL;
D O I
10.1137/0331019
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Fleming and Viot [Indiana Univ. Math. J., 28 (1979), pp. 817-843] introduced a class of probability-measure-valued diffusion processes that has attracted the interest of both pure and applied probabilists. This paper surveys the subject of Fleming-Viot processes as it relates to population genetics. Topics include: 1. Introduction. 2. Some measure-valued Markov chains. 2.1. A diploid model. 2.2. The Wright-Fisher model. 2.3. A Moran model. 3. The Fleming-Viot process: characterization. 4. Convergence. 5. Ergodicity. 6. An infinite particle system. 7. Bounded mutation operators. 8. Reversibility. 9. Examples. 9.1. Continuous-state stepwise-mutation model. 9.2. Infinitely-many-neutral-alleles model. 9.3. Infinitely-many-neutral-alleles model with ages. 9.4. Two-locus model with recombination. 9.5. n-locus model with gene conversion. 9.6. Infinitely-many-sites model without recombination. 9.7. Infinitely-many-neutral-alleles model with allelic genealogies.
引用
收藏
页码:345 / 386
页数:42
相关论文
共 81 条
[1]  
CROW JF, 1989, GENETICS, V121, P631
[2]  
DAWSON D. A., 1978, CANAD J STAT, V6, P143, DOI [10.2307/3315044, DOI 10.2307/3315044]
[3]   WANDERING RANDOM MEASURES IN THE FLEMING-VIOT MODEL [J].
DAWSON, DA ;
HOCHBERG, KJ .
ANNALS OF PROBABILITY, 1982, 10 (03) :554-580
[4]  
DONNELLY P, 1986, ADV APPL PROBAB, V18, P1023
[5]   CONSISTENT ORDERED SAMPLING DISTRIBUTIONS - CHARACTERIZATION AND CONVERGENCE [J].
DONNELLY, P ;
JOYCE, P .
ADVANCES IN APPLIED PROBABILITY, 1991, 23 (02) :229-258
[6]   THE AGES OF ALLELES AND A COALESCENT [J].
DONNELLY, P ;
TAVARE, S .
ADVANCES IN APPLIED PROBABILITY, 1986, 18 (01) :1-19
[7]   PARTITION STRUCTURES, POLYA URNS, THE EWENS SAMPLING FORMULA, AND THE AGES OF ALLELES [J].
DONNELLY, P .
THEORETICAL POPULATION BIOLOGY, 1986, 30 (02) :271-288
[8]   CONTINUITY AND WEAK-CONVERGENCE OF RANKED AND SIZE-BIASED PERMUTATIONS ON THE INFINITE SIMPLEX [J].
DONNELLY, P ;
JOYCE, P .
STOCHASTIC PROCESSES AND THEIR APPLICATIONS, 1989, 31 (01) :89-103
[9]   THE POPULATION GENEALOGY OF THE INFINITELY - MANY NEUTRAL ALLELES MODEL [J].
DONNELLY, P ;
TAVARE, S .
JOURNAL OF MATHEMATICAL BIOLOGY, 1987, 25 (04) :381-391
[10]  
DONNELLY P, 1993, UNPUB PARTICLE REPRE