ON FINDING ALL SUBOPTIMAL FOLDINGS OF AN RNA MOLECULE

被引:1669
作者
ZUKER, M [1 ]
机构
[1] NATL RES COUNCIL CANADA, DIV BIOL SCI, PROT LAB, BIOMOLEC MODELING SECT, OTTAWA K1A 0R6, ONTARIO, CANADA
关键词
D O I
10.1126/science.2468181
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
引用
收藏
页码:48 / 52
页数:5
相关论文
共 31 条
  • [11] 3-DIMENSIONAL TERTIARY STRUCTURE OF YEAST PHENYLALANINE TRANSFER-RNA
    KIM, SH
    SUDDATH, FL
    QUIGLEY, GJ
    MCPHERSON, A
    SUSSMAN, JL
    WANG, AHJ
    SEEMAN, NC
    RICH, A
    [J]. SCIENCE, 1974, 185 (4149) : 435 - 440
  • [12] SELF-SPLICING RNA - AUTO-EXCISION AND AUTO-CYCLIZATION OF THE RIBOSOMAL-RNA INTERVENING SEQUENCE OF TETRAHYMENA
    KRUGER, K
    GRABOWSKI, PJ
    ZAUG, AJ
    SANDS, J
    GOTTSCHLING, DE
    CECH, TR
    [J]. CELL, 1982, 31 (01) : 147 - 157
  • [13] SEQUENCE COMPARISON OF THE RDNA INTRONS FROM 6 DIFFERENT SPECIES OF TETRAHYMENA
    NIELSEN, H
    ENGBERG, J
    [J]. NUCLEIC ACIDS RESEARCH, 1985, 13 (20) : 7445 - 7455
  • [14] FAST ALGORITHM FOR PREDICTING THE SECONDARY STRUCTURE OF SINGLE-STRANDED RNA
    NUSSINOV, R
    JACOBSON, AB
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1980, 77 (11): : 6309 - 6313
  • [15] ALGORITHMS FOR LOOP MATCHINGS
    NUSSINOV, R
    PIECZENIK, G
    GRIGGS, JR
    KLEITMAN, DJ
    [J]. SIAM JOURNAL ON APPLIED MATHEMATICS, 1978, 35 (01) : 68 - 82
  • [16] AN ENERGY-MODEL THAT PREDICTS THE CORRECT FOLDING OF BOTH THE TRANSFER-RNA AND THE 5S RNA MOLECULES
    PAPANICOLAOU, C
    GOUY, M
    NINIO, J
    [J]. NUCLEIC ACIDS RESEARCH, 1984, 12 (01) : 31 - 44
  • [17] METHOD FOR PREDICTING RNA SECONDARY STRUCTURE
    PIPAS, JM
    MCMAHON, JE
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1975, 72 (06) : 2017 - 2021
  • [18] A NEW PRINCIPLE OF RNA FOLDING BASED ON PSEUDOKNOTTING
    PLEIJ, CWA
    RIETVELD, K
    BOSCH, L
    [J]. NUCLEIC ACIDS RESEARCH, 1985, 13 (05) : 1717 - 1731
  • [19] A PSEUDOKNOTTED RNA OLIGONUCLEOTIDE
    PUGLISI, JD
    WYATT, JR
    TINOCO, I
    [J]. NATURE, 1988, 331 (6153) : 283 - 286
  • [20] DYNAMICS AND INTERACTIONS OF VIROIDS
    RIESNER, D
    COLPAN, M
    GOODMAN, TC
    NAGEL, L
    SCHUMACHER, J
    STEGER, G
    HOFMANN, H
    [J]. JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 1983, 1 (03) : 669 - 688