A corky patch syndrome that effects potato tuber tissue may be a later manifestation of pink eye disease of potato although an actual cause and effect relationship between the two diseases has not been firmly established. The causal agent for pink eye of potato is unknown but the disease has been associated with the fungi Verticillium and Rhizoctonia and the bacterium Pseudomonal fluorescens. Pink eye and corky patch symptoms on the periderm of affected tubers are accompanied by a band of tissue beneath that is intensely auto-fluorescent when viewed under ultraviolet illumination. Studies to determine the cause of the fluorescent reaction were performed using HPLC and a fluorescence monitor. Three phenylpropanoid compounds, chlorogenic acid, esculin and scopoletin, were found to be involved. It appears that these compounds are produced by tuber tissues in response to pathogen invasion and also as part of the wound healing process. Tissues with corky patch syndrome, silver scurf and root-knot nematode contained high concentrations of chlorogenic acid and esculin and low concentrations of scopoletin. Tissues infected with dry rot were visibly less fluorescent, and contained less chlorogenic acid and esculin, and no detectable level of scopoletin.