USE OF LOW-MOLECULAR-WEIGHT POLYETHYLENE-GLYCOL IN THE CRYSTALLIZATION OF RNA OLIGOMERS

被引:15
作者
BAEYENS, KJ
JANCARIK, J
HOLBROOK, SR
机构
[1] LAWRENCE BERKELEY LAB,MELVIN CALVIN LAB,DIV STRUCT BIOL,BERKELEY,CA 94720
[2] UNIV CALIF BERKELEY,DEPT CHEM,BERKELEY,CA 94720
来源
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY | 1994年 / 50卷
关键词
D O I
10.1107/S0907444994003458
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We have crystallized a variety of RNA oligonucleotides in a form suitable for X-ray diffraction studies using polyethylene glycol with a low-molecular-weight distribution (PEG 400) as the precipitant. Crystallization experiments on a set of 26 RNA oligomers ranging from eight to 12 nucleotides in length resulted in eight diffraction-quality crystals. Of these eight RNA crystals, six utilized PEG 400 as the precipitating agent. We have also been able to obtain large single crystals of a DNA-RNA hybrid, transfer RNA (two different conditions) and a catalytic RNA from PEG 400 solutions. These results suggest that PEG 400 may be a generally useful alternative to 2-methyl-2,4-pentanediol (MPD) which has, thus far, been the most successful precipitant for DNA oligomers.
引用
收藏
页码:764 / 767
页数:4
相关论文
共 11 条
[1]   CRYSTALLOGRAPHIC STRUCTURE OF AN RNA HELIX - [U(UA)6A]2 [J].
DOCKBREGEON, AC ;
CHEVRIER, B ;
PODJARNY, A ;
JOHNSON, J ;
DEBEAR, JS ;
GOUGH, GR ;
GILHAM, PT ;
MORAS, D .
JOURNAL OF MOLECULAR BIOLOGY, 1989, 209 (03) :459-474
[2]  
Ducruix A., 1992, CRYSTALLIZATION NUCL
[3]  
HOLBROOK SR, 1985, METHOD ENZYMOL, V114, P167
[4]   CRYSTALLIZATION AND PRELIMINARY CRYSTALLOGRAPHIC INVESTIGATION OF A DNA-RNA HYBRID [J].
HOLBROOK, SR ;
TINOCO, I ;
YOUNG, TS ;
KIM, SH .
JOURNAL OF MOLECULAR BIOLOGY, 1981, 153 (03) :837-840
[5]   SPARSE-MATRIX SAMPLING - A SCREENING METHOD FOR CRYSTALLIZATION OF PROTEINS [J].
JANCARIK, J ;
KIM, SH .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1991, 24 :409-411
[6]   HIGH-RESOLUTION CRYSTALS AND PRELIMINARY-X-RAY DIFFRACTION STUDIES OF A CATALYTIC RNA [J].
KIM, R ;
HOLBROOK, EL ;
JANCARIK, J ;
PANDIT, J ;
WENG, XW ;
BOHM, A ;
KIM, SH .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :290-292
[7]   X-RAY CRYSTALLOGRAPHIC STUDIES OF POLYMORPHIC FORMS OF YEAST PHENYLALANINE TRANSFER-RNA [J].
KIM, SH ;
QUIGLEY, G ;
SUDDATH, FL ;
MCPHERSON, A ;
SNEDEN, D ;
KIM, JJ ;
WEINZIERL, J ;
RICH, A .
JOURNAL OF MOLECULAR BIOLOGY, 1973, 75 (02) :421-+
[8]   LARGE-SCALE CHEMICAL SYNTHESIS, PURIFICATION AND CRYSTALLIZATION OF RNA-DNA CHIMERAS [J].
USMAN, N ;
EGLI, M ;
RICH, A .
NUCLEIC ACIDS RESEARCH, 1992, 20 (24) :6695-6699
[9]  
Wang A.H.J., 1990, METHODS, V1, P91
[10]   AT BASE-PAIRS ARE LESS STABLE THAN GC BASE-PAIRS IN Z-DNA - THE CRYSTAL-STRUCTURE OF D(M5CGTAM5CG) [J].
WANG, AHJ ;
HAKOSHIMA, T ;
VANDERMAREL, G ;
VANBOOM, JH ;
RICH, A .
CELL, 1984, 37 (01) :321-331