MAJOR GROOVE DNA RECOGNITION BY BETA-SHEETS - THE RIBBON-HELIX-HELIX FAMILY OF GENE REGULATORY PROTEINS

被引:73
作者
RAUMANN, BE
BROWN, BM
SAUER, RT
机构
基金
美国国家卫生研究院;
关键词
D O I
10.1016/S0959-440X(94)90057-4
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Co-crystal structures of the MetJ and Arc repressors reveal that both proteins use a two-stranded antiparallel beta-sheet for recognition of bases in the major groove of operator DNA and make conserved contacts with the DNA backbone. Important differences between the two proteins include the surfaces used for cooperative dimer-dimer contacts and the symmetry and positions of base contacts made by beta-sheet side chains.
引用
收藏
页码:36 / 43
页数:8
相关论文
共 26 条
[11]   BIOCHEMICAL AND GENETIC-ANALYSIS OF OPERATOR CONTACTS MADE BY RESIDUES WITHIN THE BETA-SHEET DNA-BINDING MOTIF OF MNT REPRESSOR [J].
KNIGHT, KL ;
SAUER, RT .
EMBO JOURNAL, 1992, 11 (01) :215-223
[12]   THE MNT REPRESSOR OF BACTERIOPHAGE-P22 - ROLE OF C-TERMINAL RESIDUES IN OPERATOR BINDING AND TETRAMER FORMATION [J].
KNIGHT, KL ;
SAUER, RT .
BIOCHEMISTRY, 1988, 27 (06) :2088-2094
[13]   MOLSCRIPT - A PROGRAM TO PRODUCE BOTH DETAILED AND SCHEMATIC PLOTS OF PROTEIN STRUCTURES [J].
KRAULIS, PJ .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1991, 24 :946-950
[14]   CHARACTERIZATION OF THE ESCHERICHIA-COLI F-FACTOR TRAY GENE-PRODUCT AND ITS BINDING-SITES [J].
NELSON, WC ;
MORTON, BS ;
LAHUE, EE ;
MATSON, SW .
JOURNAL OF BACTERIOLOGY, 1993, 175 (08) :2221-2228
[15]   TRANSCRIPTION FACTORS - STRUCTURAL FAMILIES AND PRINCIPLES OF DNA RECOGNITION [J].
PABO, CO ;
SAUER, RT .
ANNUAL REVIEW OF BIOCHEMISTRY, 1992, 61 :1053-1095
[16]   MOLTEN-GLOBULE CONFORMATION OF ARC REPRESSOR MONOMERS DETERMINED BY HIGH-PRESSURE H-1-NMR SPECTROSCOPY [J].
PENG, XD ;
JONAS, J ;
SILVA, JL .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (05) :1776-1780
[17]   COOPERATIVE TANDEM BINDING OF MET REPRESSOR OF ESCHERICHIA-COLI [J].
PHILLIPS, SEV ;
MANFIELD, I ;
PARSONS, I ;
DAVIDSON, BE ;
RAFFERTY, JB ;
SOMERS, WS ;
MARGARITA, D ;
COHEN, GN ;
SAINTGIRONS, I ;
STOCKLEY, PG .
NATURE, 1989, 341 (6244) :711-715
[18]  
PHILLIPS SEV, 1993, NUCLEIC ACIDS MOL BI, V7, P28
[19]   Specific beta-sheet interactions [J].
Phillips, Simon E. V. .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 1991, 1 (01) :89-98
[20]   3-DIMENSIONAL CRYSTAL-STRUCTURES OF ESCHERICHIA-COLI MET REPRESSOR WITH AND WITHOUT COREPRESSOR [J].
RAFFERTY, JB ;
SOMERS, WS ;
STGIRONS, I ;
PHILLIPS, SEV .
NATURE, 1989, 341 (6244) :705-710