HIGH-RESOLUTION X-RAY-DIFFRACTION AND AB-INITIO QUANTUM-CHEMICAL STUDIES OF GLYCOLURIL, A BIOTIN ANALOG

被引:25
作者
LI, NY
MALUENDES, S
BLESSING, RH
DUPUIS, M
MOSS, GR
DETITTA, GT
机构
[1] MED FDN BUFFALO INC, BUFFALO, NY 14203 USA
[2] IBM CORP, KINGSTON, NY 12401 USA
关键词
D O I
10.1021/ja00094a002
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The electrostatic properties of glycoluril, a model for the ureido ring of biotin, have been examined by high-resolution single-crystal X-ray diffraction and by ab initio quantum chemical calculation. Two crystalline forms of glycoluril were studied crystallographically, both at 105 K and at 293 K. Calculations were performed both on the isolated molecule and on a five-molecule cluster lifted out of one of the crystal structures. Qualitative agreement among the experiments and calculations was universal; quantitative agreement was observed between the low temperature diffraction results and the cluster calculations. The inner pocket of the bicyclic ring compound is a basin of negative electrostatic potential, reaching a minimum near the ureido oxygen atoms of -0.2 e/Angstrom, while the back side of the molecule is everywhere of positive potential. The transferability of molecular properties from crystal form to crystal form extends beyond the electrostatic properties to include the rigid body thermal motions at a specific temperature. Anharmonic thermal motions of the oxygen and nitrogen atoms of glycoluril parallel nonrigid librations needed to model those same atoms in a rigid body formalism.
引用
收藏
页码:6494 / 6507
页数:14
相关论文
共 31 条
[1]   ON THE STRUCTURES OF SOME ADDUCTS OF BIOTIN WITH ELECTROPHILES - DOES SULFUR TRANS-ANNULAR INTERACTION WITH THE CARBONYL GROUP PLAY A ROLE IN THE CHEMISTRY OR BIOCHEMISTRY OF BIOTIN [J].
BERKESSEL, A ;
BRESLOW, R .
BIOORGANIC CHEMISTRY, 1986, 14 (03) :249-261
[2]  
Blessing R. H., 1987, CRYSTALLOGR REV, V1, P3
[4]   BIOTIN BASICITY [J].
CAPLOW, M .
BIOCHEMISTRY, 1969, 8 (06) :2656-&
[5]   CRYSTAL AND MOLECULAR-STRUCTURE OF D,L-DETHIOBIOTIN - ROLE OF SULFUR IN BIOTIN STEREOCHEMISTRY [J].
CHEN, CS ;
PARTHASARATHY, R ;
DETITTA, GT .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1976, 98 (16) :4983-4990
[6]   ATOMIC SCREENING CONSTANTS FROM SCF FUNCTIONS [J].
CLEMENTI, E ;
RAIMONDI, DL .
JOURNAL OF CHEMICAL PHYSICS, 1963, 38 (11) :2686-&
[7]  
COPPENS P, 1977, ISRAEL J CHEM, V16, P163
[8]  
COPPENS P, 1982, ELECTRON DISTRIBUTIO, P61
[9]   CARBOXYBIOTIN TRANSLOCATION MECHANISMS SUGGESTED BY DIFFRACTION STUDIES OF BIOTIN AND ITS VITAMERS [J].
DETITTA, GT ;
PARTHASARATHY, R ;
BLESSING, RH ;
STALLINGS, W .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1980, 77 (01) :333-337
[10]   MOLECULAR-STRUCTURE OF BIOTIN - RESULTS OF 2 INDEPENDENT CRYSTAL-STRUCTURE INVESTIGATIONS [J].
DETITTA, GT ;
EDMONDS, JW ;
STALLINGS, W ;
DONOHUE, J .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1976, 98 (07) :1920-1926