A ROLE FOR THE EPSILON-AMINO GROUP OF LYSINE-334 OF RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE IN THE ADDITION OF CARBON-DIOXIDE TO THE 2,3-ENEDIOL(ATE) OF RIBULOSE 1,5-BISPHOSPHATE

被引:46
作者
LORIMER, GH [1 ]
CHEN, YR [1 ]
HARTMAN, FC [1 ]
机构
[1] OAK RIDGE NATL LAB,DIV BIOL,PROT ENGN PROGRAM,OAK RIDGE,TN 37831
关键词
D O I
10.1021/bi00086a006
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Earlier structural and functional studies of ribulose-1,5-bisphosphate carboxylase/oxygenase imply that K334 facilitates the addition of gaseous substrate to the 2,3-enediol(ate) derived from ribulose 1,5-bisphosphate. Crystallographic analysis of the activated spinach enzyme [Knight et al. (1990) J. Mol. Biol. 215, 113-160] shows that the lysyl side chain is appropriately positioned to stabilize the transition state for the addition of CO2 to the enediol(ate). Furthermore, despite total impairment of carboxylase and oxygenase activities, site-directed mutants of the Rhodospirillum rubrum enzyme with replacements for lysine K334 (formerly designated K329) retain the capacity to enolize ribulose bisphosphate, demonstrating that the primary catalytic lesion lies beyond this initial step [Soper et al. (1988) Protein Eng. 2, 39-44; Hartman & Lee (1989) J. Biol. Chem. 264, 11784-11789]. We now show that the K334C mutant is also competent in the latter stages of catalysis, whereby 2'-carboxy-3-keto-D-arabinitol 1,5-bisphosphate, the six-carbon intermediate of the carboxylation pathway, is correctly processed to 3-phosphoglycerate. Thus, the impairment of the mutant in overall catalysis can be attributed to preferential disruption of the reaction of CO2 or O2 with the enzyme-bound enediol(ate). Chemical rescue of the K334C mutant by aminoethylation and aminopropylation shows that this disruption reflects, at least in part, a failure to adequately stabilize the relevant transition state. With several simplifying assumptions, the CO2/O2 specificity factor tau can be reduced to the ratio of the fundamental second-order rate constants for the interaction of the gaseous substrates with the enzyme-bound 2,3-enediol(ate) of ribulose bisphosphate. The tau-value is therefore a measure of the differential stabilization of the transition states that lead to the carboxylated and oxygenated intermediates. Our observations of altered tau-values and hence differential perturbation of transition states, correlated with substitutions of K334 with S-(2-aminoethyl)cysteine and S-(3-aminopropyl)cysteine, lend strong credence to one assigned role for this lysyl residue.
引用
收藏
页码:9018 / 9024
页数:7
相关论文
共 43 条
[1]   STRAINING THE DOUBLE-BOND IN 1,2-DIHYDROXYETHYLENE - A SIMPLE THEORETICAL-MODEL FOR THE ENEDIOL MOIETY IN RUBISCO SUBSTRATE AND ANALOGS [J].
ANDRES, J ;
SAFONT, VS ;
TAPIA, O .
CHEMICAL PHYSICS LETTERS, 1992, 198 (05) :515-520
[2]  
ANDREWS TJ, 1991, J BIOL CHEM, V266, P9447
[3]  
Andrews TJ, 1987, BIOCH PLANTS, V10, P131
[4]  
[Anonymous], 1985, ENZYME STRUCTURE MEC
[5]  
CHEN ZX, 1991, PLANTA, V183, P597, DOI 10.1007/BF00194282
[6]   COMPLEMENTING AMINO-ACID SUBSTITUTIONS WITHIN LOOP-6 OF THE ALPHA-BETA-BARREL ACTIVE-SITE INFLUENCE THE CO2/O2 SPECIFICITY OF CHLOROPLAST RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE OXYGENASE [J].
CHEN, ZX ;
YU, WZ ;
LEE, JH ;
DIAO, R ;
SPREITZER, RJ .
BIOCHEMISTRY, 1991, 30 (36) :8846-8850
[7]   KINETIC COMPETENCE OF ENZYMATIC INTERMEDIATES - FACT OR FICTION [J].
CLELAND, WW .
BIOCHEMISTRY, 1990, 29 (13) :3194-3197
[8]  
CURMI PMG, 1992, J BIOL CHEM, V267, P16980
[9]   The activated complex and the absolute rate of chemical reactions [J].
Eyring, H .
CHEMICAL REVIEWS, 1935, 17 (01) :65-77
[10]   HYDROGEN-BONDING AND BIOLOGICAL SPECIFICITY ANALYZED BY PROTEIN ENGINEERING [J].
FERSHT, AR ;
SHI, JP ;
KNILLJONES, J ;
LOWE, DM ;
WILKINSON, AJ ;
BLOW, DM ;
BRICK, P ;
CARTER, P ;
WAYE, MMY ;
WINTER, G .
NATURE, 1985, 314 (6008) :235-238