2 OPEN COMPLEXES AND A REQUIREMENT FOR MG2+ TO OPEN THE LAMBDA-P(R) TRANSCRIPTION START SITE

被引:93
作者
SUH, WC
ROSS, W
RECORD, MT
机构
[1] UNIV WISCONSIN,DEPT CHEM,MADISON,WI 53706
[2] UNIV WISCONSIN,DEPT BIOCHEM,MADISON,WI 53706
[3] UNIV WISCONSIN,DEPT BACTERIOL,MADISON,WI 53706
关键词
D O I
10.1126/science.8420002
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Potassium permanganate (KMnO4) footprinting in the absence and presence of magnesium (Mg2+) at the lambdaP(R) promoter identified two different open complexes with Escherichia coli Esigma70 RNA polymerase (designated RP(o1) and RP(o2). The single-stranded region in RP(o1), (formed in the absence of Mg2+) was at most 12 bases long, whereas that in RP(o2) (formed in the presence of Mg2+) spanned at least 14 bases. Only in RP(o2) did the single-stranded region extend to the start point of transcription (+1, +2). These results provide a structural basis for the requirement for uptake of Mg2+ in the formation of RP(o2) from RP(o1), as deduced from kinetic studies at this promoter.
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页码:358 / 361
页数:4
相关论文
共 30 条
[1]   MANIPULATION OF INTRACELLULAR MAGNESIUM CONTENT IN POLYMYXIN-B NONAPEPTIDE-SENSITIZED ESCHERICHIA-COLI BY IONOPHORE A23187 [J].
ALATOSSAVA, T ;
JUTTE, H ;
KUHN, A ;
KELLENBERGER, E .
JOURNAL OF BACTERIOLOGY, 1985, 162 (01) :413-419
[2]   DNA SUPERCOILING PROMOTES FORMATION OF A BENT REPRESSION LOOP IN LAC DNA [J].
BOROWIEC, JA ;
LI, Z ;
SASSEDWIGHT, S ;
GRALLA, JD .
JOURNAL OF MOLECULAR BIOLOGY, 1987, 196 (01) :101-111
[3]   KINETICS OF OPEN COMPLEX-FORMATION BETWEEN ESCHERICHIA-COLI RNA-POLYMERASE AND THE LAC UV5 PROMOTER - EVIDENCE FOR A SEQUENTIAL MECHANISM INVOLVING 3 STEPS [J].
BUC, H ;
MCCLURE, WR .
BIOCHEMISTRY, 1985, 24 (11) :2712-2723
[4]  
BUC H, 1989, NUCLEIC ACIDS MOL BI, V1, P186
[5]   FINE MAPPING OF DNA SINGLE-STRANDED REGIONS USING BASE-SPECIFIC CHEMICAL PROBES - STUDY OF AN OPEN COMPLEX FORMED BETWEEN RNA-POLYMERASE AND THE LAC UV5 PROMOTER [J].
BUCKLE, M ;
BUC, H .
BIOCHEMISTRY, 1989, 28 (10) :4388-4396
[6]   INTERMEDIATES IN THE FORMATION OF THE OPEN COMPLEX BY RNA-POLYMERASE HOLOENZYME CONTAINING THE SIGMA FACTOR SIGMA-32 AT THE GROE PROMOTER [J].
COWING, DW ;
MECSAS, J ;
RECORD, MT ;
GROSS, CA .
JOURNAL OF MOLECULAR BIOLOGY, 1989, 210 (03) :521-530
[7]   SELECTIVE DEGRADATION OF PYRIMIDINES IN NUCLEIC ACIDS BY PERMANGANATE OXIDATION [J].
HAYATSU, H ;
UKITA, T .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1967, 29 (04) :556-&
[8]   STRUCTURE OF TRANSCRIPTION ELONGATION COMPLEXES INVIVO [J].
KAINZ, M ;
ROBERTS, J .
SCIENCE, 1992, 255 (5046) :838-841
[9]   MAPPING OF SINGLE-STRANDED REGIONS IN DUPLEX DNA AT THE SEQUENCE LEVEL - SINGLE-STRAND-SPECIFIC CYTOSINE METHYLATION IN RNA-POLYMERASE PROMOTER COMPLEXES [J].
KIRKEGAARD, K ;
BUC, H ;
SPASSKY, A ;
WANG, JC .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1983, 80 (09) :2544-2548
[10]  
KLADDE MP, IN PRESS J MOL BIOL