ANALYSIS OF RNA SECONDARY STRUCTURE BY PHOTO-CHEMICAL REVERSAL OF PSORALEN CROSSLINKS

被引:49
作者
RABIN, D
CROTHERS, DM
机构
[1] Department of Chemistry, Yale University, New Haven
基金
美国国家卫生研究院;
关键词
D O I
10.1093/nar/7.3.689
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Aminomethyltrioxsalen (AMT), a psoralen, is known to cause interstrand crosslinks in double stranded nucleic acids. We have demonstrated the photochemical reversal of this reaction, and have used this result to develop a method for identification of specific sequences which are adjacent because of RNA secondary structure formation. E. coli 5S rRNA is used as a model system. We isolated and characterized a product that is derived from the stem region of 5S RNA. © 1979 Information Retrieval Limited.
引用
收藏
页码:689 / 703
页数:15
相关论文
共 35 条
[1]   SPECIFIC TERMINATION OF RNA-POLYMERASE SYNTHESIS AS A METHOD OF RNA AND DNA SEQUENCING [J].
AXELROD, VD ;
VARTIKYAN, RM ;
AIVAZASHVILI, VA ;
BEABEALASHVILI, RS .
NUCLEIC ACIDS RESEARCH, 1978, 5 (10) :3549-3563
[2]  
BARRELL BG, 1971, P NUCLEIC ACID RES, V2
[3]   ACCESSIBILITY OF ESCHERICHIA-COLI S-5 RNA BASE RESIDUES TO CHEMICAL REAGENTS - INFLUENCE OF CHEMICAL ALTERATIONS ON AFFINITY OF S-5 RNA FOR S-50 SUBUNIT STRUCTURE [J].
BELLEMARE, G ;
JORDAN, BR ;
ROCCASER.J ;
MONIER, R .
BIOCHIMIE, 1972, 54 (11-1) :1453-1466
[4]   STABILITY OF RIBONUCLEIC-ACID DOUBLE-STRANDED HELICES [J].
BORER, PN ;
DENGLER, B ;
TINOCO, I ;
UHLENBECK, OC .
JOURNAL OF MOLECULAR BIOLOGY, 1974, 86 (04) :843-853
[5]   INACTIVATION AND MUTAGENESIS ON ISOLATED DNA .5. IMPORTANCE OF REPAIRING ENZYMES FOR INACTIVATION OF TRANSFORMING DNA IN-VITRO [J].
BRESLER, SE ;
KALININ, VL ;
PERUMOV, DA .
MUTATION RESEARCH, 1970, 9 (01) :1-&
[6]  
BROSIUS J, 1978, P NATL ACAD SCI USA, V75, P4801, DOI 10.1073/pnas.75.10.4801
[8]   STUDIES ON REACTIVATION OF BACTERIA PHOTODAMAGED BY PSORALEN [J].
CHANDRA, P ;
KRAFT, S ;
WACKER, A ;
RODIGHIERO, S ;
DALLACQU.F ;
MARCIANI, S .
BIOPHYSIK, 1971, 7 (04) :251-+
[9]  
Dall'Acqua F, 1968, Ric Sci, V38, P1094
[10]  
DEWACHTER R, 1971, METHOD ENZYMOL, V21, P167