INCORPORATION OF CRYSTALLOGRAPHIC TEMPERATURE FACTORS IN THE STATISTICAL-ANALYSIS OF PROTEIN TERTIARY STRUCTURES

被引:19
作者
BOTT, R [1 ]
FRANE, J [1 ]
机构
[1] GENENTECH INC, SAN FRANCISCO, CA 94080 USA
来源
PROTEIN ENGINEERING | 1990年 / 3卷 / 08期
关键词
Site-specific variant structure; X-ray crystallography;
D O I
10.1093/protein/3.8.649
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A method to identify statistically significant differences between equivalent atoms in two closely related protein X-ray crystallographic structures is described. This method uses the linear relationship found between the logarithm of the distance between equivalent atoms and their mean temperature factor to determine, by linear regression, the expected difference and variance. © 1990 Oxford University Press.
引用
收藏
页码:649 / 657
页数:9
相关论文
共 15 条
[11]   REFINED CRYSTAL-STRUCTURE OF GAMMA-CHYMOTRYPSIN AT 1.9 A RESOLUTION - COMPARISON WITH OTHER PANCREATIC SERINE PROTEASES [J].
COHEN, GH ;
SILVERTON, EW ;
DAVIES, DR .
JOURNAL OF MOLECULAR BIOLOGY, 1981, 148 (04) :449-479
[12]   THE ACCURACY OF ELECTRON-DENSITY MAPS IN X-RAY ANALYSIS WITH SPECIAL REFERENCE TO DIBENZYL [J].
CRUICKSHANK, DWJ .
ACTA CRYSTALLOGRAPHICA, 1949, 2 (02) :65-82
[13]  
KATZ BA, 1986, J BIOL CHEM, V261, P5480
[14]   TRAITEMENT STATISTIQUE DES ERREURS DANS LA DETERMINATION DES STRUCTURES CRISTALLINES [J].
LUZZATI, V .
ACTA CRYSTALLOGRAPHICA, 1952, 5 (06) :802-810
[15]   STRUCTURE OF ALPHA-CHYMOTRYPSIN REFINED AT 1.68 A RESOLUTION [J].
TSUKADA, H ;
BLOW, DM .
JOURNAL OF MOLECULAR BIOLOGY, 1985, 184 (04) :703-711