STRUCTURAL HOMOLOGY BETWEEN RBS REPRESSOR AND RIBOSE BINDING-PROTEIN IMPLIES FUNCTIONAL SIMILARITY

被引:32
作者
MAUZY, CA [1 ]
HERMODSON, MA [1 ]
机构
[1] PURDUE UNIV,DEPT BIOCHEM,W LAFAYETTE,IN 47907
关键词
BINDING PROTEINS; CHEMOTAXIS; ESCHERICHIA-COLI; EVOLUTION; PROTEIN HOMOLOGY; REPRESSORS; RIBOSE TRANSPORT;
D O I
10.1002/pro.5560010702
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The deduced amino acid sequence of the rbs repressor, RbsR, of Escherichia coli is homologous over its C-terminal 272 residues to the entire sequence of the periplasmic ribose binding protein. RbsR is also homologous to a family of bacterial repressor proteins including LacI. This implies that the structure of the repressor consists of a two-domain binding protein portion attached to a DNA-binding domain having the four-helix structure of the LacI headpiece. The implications of these relationships to the mechanism of this class of repressors are discussed.
引用
收藏
页码:843 / 849
页数:7
相关论文
共 42 条
[11]   MISSENSE MUTATION IN THE LACI GENE OF ESCHERICHIA-COLI - INFERENCES ON THE STRUCTURE OF THE REPRESSOR PROTEIN [J].
GORDON, AJE ;
BURNS, PA ;
FIX, DF ;
YATAGAI, F ;
ALLEN, FL ;
HORSFALL, MJ ;
HALLIDAY, JA ;
GRAY, J ;
BERNELOTMOENS, C ;
GLICKMAN, BW .
JOURNAL OF MOLECULAR BIOLOGY, 1988, 200 (02) :239-251
[12]  
JORDAN SR, 1988, SCIENCE, V242, P893, DOI 10.1126/science.3187530
[13]   A PROTEIN-STRUCTURE FROM NUCLEAR MAGNETIC-RESONANCE DATA - LAC REPRESSOR HEADPIECE [J].
KAPTEIN, R ;
ZUIDERWEG, ERP ;
SCHEEK, RM ;
BOELENS, R ;
VANGUNSTEREN, WF .
JOURNAL OF MOLECULAR BIOLOGY, 1985, 182 (01) :179-182
[14]   GENETIC-STUDIES OF THE LAC REPRESSOR .13. EXTENSIVE AMINO-ACID REPLACEMENTS GENERATED BY THE USE OF NATURAL AND SYNTHETIC NONSENSE SUPPRESSORS [J].
KLEINA, LG ;
MILLER, JH .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 212 (02) :295-318
[15]   RAPID AND SENSITIVE PROTEIN SIMILARITY SEARCHES [J].
LIPMAN, DJ ;
PEARSON, WR .
SCIENCE, 1985, 227 (4693) :1435-1441
[16]   OPEN CONFORMATION OF A SUBSTRATE-BINDING CLEFT - F-19 NMR-STUDIES OF CLEFT ANGLE IN THE D-GALACTOSE CHEMOSENSORY RECEPTOR [J].
LUCK, LA ;
FALKE, JJ .
BIOCHEMISTRY, 1991, 30 (26) :6484-6490
[17]  
MAO B, 1982, J BIOL CHEM, V257, P1131
[18]  
MATTHEWS BW, 1985, METHOD ENZYMOL, V115, P397
[19]   STRUCTURAL AND FUNCTIONAL ANALYSES OF THE REPRESSOR, RBSR, OF THE RIBOSE OPERON OF ESCHERICHIA-COLI [J].
MAUZY, CA ;
HERMODSON, MA .
PROTEIN SCIENCE, 1992, 1 (07) :831-842
[20]  
MCKAY DB, 1982, J BIOL CHEM, V257, P9518