The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics

被引:907
作者
Elbaum-Garfinkle, Shana [1 ]
Kim, Younghoon [2 ]
Szczepaniak, Krzysztof [3 ,4 ,5 ]
Chen, Carlos Chih-Hsiung [1 ]
Eckmann, Christian R. [3 ,4 ]
Myong, Sua [2 ]
Brangwynne, Clifford P. [1 ]
机构
[1] Princeton Univ, Dept Chem & Biol Engn, Princeton, NJ 08540 USA
[2] Univ Illinois, Dept Bioengn, Urbana, IL 61801 USA
[3] Max Planck Inst Mol Cell Biol & Genet, D-01307 Dresden, Germany
[4] Univ Halle Wittenberg, Dept Genet, D-06108 Halle, Germany
[5] Dresden Int PhD Program, D-01307 Dresden, Germany
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
liquid droplets; intracellular phase transition; intrinsically disordered proteins; RNA granules; CELL-FREE FORMATION; RNA HELICASE; GERMLINE; TRANSITIONS; COMPONENTS; SIZE;
D O I
10.1073/pnas.1504822112
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
P granules and other RNA/protein bodies are membrane-less organelles that may assemble by intracellular phase separation, similar to the condensation of water vapor into droplets. However, the molecular driving forces and the nature of the condensed phases remain poorly understood. Here, we show that the Caenorhabditis elegans protein LAF-1, a DDX3 RNA helicase found in P granules, phase separates into P granule-like droplets in vitro. We adapt a microrheology technique to precisely measure the viscoelasticity of micrometer-sized LAF-1 droplets, revealing purely viscous properties highly tunable by salt and RNA concentration. RNA decreases viscosity and increases molecular dynamics within the droplet. Single molecule FRET assays suggest that this RNA fluidization results from highly dynamic RNA-protein interactions that emerge close to the droplet phase boundary. We demonstrate than an N-terminal, arginine/glycine rich, intrinsically disordered protein (IDP) domain of LAF-1 is necessary and sufficient for both phase separation and RNA-protein interactions. In vivo, RNAi knockdown of LAF-1 results in the dissolution of P granules in the early embryo, with an apparent submicromolar phase boundary comparable to that measured in vitro. Together, these findings demonstrate that LAF-1 is important for promoting P granule assembly and provide insight into the mechanism by which IDP-driven molecular interactions give rise to liquid phase organelles with tunable properties.
引用
收藏
页码:7189 / 7194
页数:6
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