Horizontal transfer of dehalogenase genes involved in the catalysis of chlorinated compounds: evidence and ecological role

被引:30
作者
Liang, Bin [1 ,2 ]
Jiang, Jiandong [1 ]
Zhang, Jun [1 ]
Zhao, Yanfu [1 ]
Li, Shunpeng [1 ]
机构
[1] Nanjing Agr Univ, Coll Life Sci, Key Lab Microbiol Engn Agr Environm, Dept Microbiol,Minist Agr, Nanjing 210095, Jiangsu, Peoples R China
[2] Harbin Inst Technol, State Key Lab Urban Water Resource & Environm, Harbin 150090, Heilongjiang, Peoples R China
关键词
Chlorinated compounds; dehalogenase genes; horizontal gene transfer (HGT); mobile genetic elements (MGEs); community adaptation; ATRAZINE-DEGRADING BACTERIUM; VINYL-CHLORIDE REDUCTASE; CHLOROBENZOATE-CATABOLIC TRANSPOSON; COMPLETE NUCLEOTIDE-SEQUENCE; ALCALIGENES-EUTROPHUS NH9; DEHALOCOCCOIDES SP STRAIN; INDUSTRIAL WASTE-WATER; PSEUDOMONAS-PUTIDA F1; CLC GENOMIC ISLAND; 2,4-DICHLOROPHENOXYACETIC ACID;
D O I
10.3109/1040841X.2011.618114
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Horizontal gene transfer (HGT) of dehalogenase genes is considered an important mechanism of genomic evolution, the metabolic resilience of biotopes, and microbial community adaptation in chlorinated compound-contaminated ecosystems. In this review, we summarize the current evidence for the HGT of dehalogenase genes involved in the catalysis of various chlorinated compounds, such as chlorinated alkanes and alkanoic acids, chlorinated ethenes, chlorinated herbicide, and chlorinated aromatics. We also highlight the ecological role of HGT as it relates to the contribution to the diversification of dehalogenating microorganisms and the resulting facilitation of rapid microbial community adaptation to ecosystem contaminated with chlorinated compounds.
引用
收藏
页码:95 / 110
页数:16
相关论文
共 142 条
[61]  
Lawrence JG, 1996, GENETICS, V143, P1843
[62]  
Lee JS, 2003, J MICROBIOL, V41, P89
[63]   Genetic characterization of insertion sequence ISJP4 on plasmid pJP4 from Ralstonia eutropha JMP134 [J].
Leveau, JHJ ;
van der Meer, JR .
GENE, 1997, 202 (1-2) :103-114
[64]   Facilitation of Bacterial Adaptation to Chlorothalonil-Contaminated Sites by Horizontal Transfer of the Chlorothalonil Hydrolytic Dehalogenase Gene [J].
Liang, Bin ;
Wang, Guangli ;
Zhao, Yanfu ;
Chen, Kai ;
Li, Shunpeng ;
Jiang, Jiandong .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2011, 77 (12) :4268-4272
[65]   Hydrolytic Dechlorination of Chlorothalonil by Ochrobactrum sp CTN-11 Isolated from a Chlorothalonil-Contaminated Soil [J].
Liang, Bin ;
Li, Rong ;
Jiang, Dong ;
Sun, Jiquan ;
Qiu, Jiguo ;
Zhao, Yanfu ;
Li, Shunpeng ;
Jiang, Jiandong .
CURRENT MICROBIOLOGY, 2010, 61 (03) :226-233
[66]   Transposase-dependent formation of circular IS256 derivatives in Staphylococcus epidermidis and Staphylococcus aureus [J].
Loessner, I ;
Dietrich, K ;
Dittrich, D ;
Hacker, J ;
Ziebuhr, W .
JOURNAL OF BACTERIOLOGY, 2002, 184 (17) :4709-4714
[67]   Isolation and characterization of Tn-Dha1, a transposon containing the tetrachloroethene reductive dehalogenase of Desulfitobacterium hafniense strain TCE1 [J].
Maillard, J ;
Regeard, C ;
Holliger, C .
ENVIRONMENTAL MICROBIOLOGY, 2005, 7 (01) :107-117
[68]   Complete nucleotide sequence and organization of the atrazine catabolic plasmid pADP-1 from Pseudomonas sp. strain ADP [J].
Martinez, B ;
Tomkins, J ;
Wackett, LP ;
Wing, R ;
Sadowsky, MJ .
JOURNAL OF BACTERIOLOGY, 2001, 183 (19) :5684-5697
[69]   A novel reductive dehalogenase, identified in a contaminated groundwater enrichment culture and in Desulfitobacterium dichloroeliminans strain DCA1 is linked to dehalogenation of 1,2-dichloroethane [J].
Marzorati, Massimo ;
de Ferra, Francesca ;
Van Raemdonck, Hilde ;
Borin, Sara ;
Allifranchini, Elena ;
Carpani, Giovanna ;
Serbolisca, Luca ;
Verstraete, Willy ;
Boon, Nico ;
Daffonchio, Daniele .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2007, 73 (09) :2990-2999
[70]   The genome of Polaromonas sp strain JS']JS666:: Insights into the evolution of a hydrocarbon- and xenobiotic-degrading bacterium, and features of relevance to biotechnology [J].
Mattes, Timothy E. ;
Alexander, Anne K. ;
Richardson, Paul M. ;
Munk, A. Christine ;
Han, Cliff S. ;
Stothard, Paul ;
Coleman, Nicholas V. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2008, 74 (20) :6405-6416