CASH -: a β-helix domain widespread among carbohydrate-binding proteins

被引:27
作者
Ciccarelli, FD
Copley, RR
Doerks, T
Russell, RB
Bork, P
机构
[1] Max Delbrueck Centrum, D-13092 Berlin, Germany
[2] European Mol Biol Lab, D-69012 Heidelberg, Germany
关键词
D O I
10.1016/S0968-0004(01)02046-1
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In this article, we describe a novel, widespread domain (CASH) that is shared by many carbohydrate-binding proteins and sugar hydrolases. This domain occurs in more than 1000 proteins distributed among all three kingdoms of life. The CASH domain is characterized by internal repetitions of glycines and hydrophobic residues that correspond to the repetitive units of a predicted or observed right-handed beta-helix structure of the pectate lyase superfamily.
引用
收藏
页码:59 / 62
页数:4
相关论文
共 29 条
[11]   TRACING THE SPREAD OF FIBRONECTIN TYPE-III DOMAINS IN BACTERIAL GLYCOHYDROLASES [J].
LITTLE, E ;
BORK, P ;
DOOLITTLE, RF .
JOURNAL OF MOLECULAR EVOLUTION, 1994, 39 (06) :631-643
[12]   DOMAIN-STRUCTURE OF THE ACETOGENIUM-KIVUI SURFACE-LAYER REVEALED BY ELECTRON CRYSTALLOGRAPHY AND SEQUENCE-ANALYSIS [J].
LUPAS, A ;
ENGELHARDT, H ;
PETERS, J ;
SANTARIUS, U ;
VOLKER, S ;
BAUMEISTER, W .
JOURNAL OF BACTERIOLOGY, 1994, 176 (05) :1224-1233
[13]   Bacterial SLH domain proteins are non-covalently anchored to the cell surface via a conserved mechanism involving wall polysaccharide pyruvylation [J].
Mesnage, S ;
Fontaine, T ;
Mignot, T ;
Delepierre, M ;
Mock, M ;
Fouet, A .
EMBO JOURNAL, 2000, 19 (17) :4473-4484
[14]  
MURZIN AG, 1995, J MOL BIOL, V247, P536, DOI 10.1016/S0022-2836(05)80134-2
[15]   A conserved motif in S-layer proteins is involved in peptidoglycan binding in Thermus thermophilus [J].
Olabarria, G ;
Carrascosa, JL ;
dePedro, MA ;
Berenguer, J .
JOURNAL OF BACTERIOLOGY, 1996, 178 (16) :4765-4772
[16]  
PATTON E, 1998, TRENDS GENET, V14, P6
[17]  
ROST B, 1994, COMPUT APPL BIOSCI, V10, P53
[18]   The genome sequence of the thermoacidophilic scavenger Thermoplasma acidophilum [J].
Ruepp, A ;
Graml, W ;
Santos-Martinez, ML ;
Koretle, KK ;
Volker, C ;
Mewes, HW ;
Frishman, D ;
Stocker, S ;
Lupas, AN ;
Baumeister, W .
NATURE, 2000, 407 (6803) :508-513
[19]   MULTIPLE PROTEIN-SEQUENCE ALIGNMENT FROM TERTIARY STRUCTURE COMPARISON - ASSIGNMENT OF GLOBAL AND RESIDUE CONFIDENCE LEVELS [J].
RUSSELL, RB ;
BARTON, GJ .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 1992, 14 (02) :309-323
[20]   Cloning and characterization of mPAL, a novel Shc SH2 domain-binding protein expressed in proliferating cells [J].
Schmandt, R ;
Liu, SK ;
McGlade, CJ .
ONCOGENE, 1999, 18 (10) :1867-1879