An extensible application for assembling annotation for genomic data

被引：33

作者：

Zhang, JH ^{[1
]}

Carey, V

Gentleman, R

机构：

[1] Harvard Univ, Sch Publ Hlth, Dana Farber Canc Inst, Dept Biostat Sci, Boston, MA 02115 USA

[2] Channing Labs, Boston, MA USA

来源：

BIOINFORMATICS | 2003年 / 19卷 / 01期

关键词：

D O I：

10.1093/bioinformatics/19.1.155

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

AnnBuilder is an R package for assembling genomic annotation data. The system currently provides parsers to process annotation data from LocusLink, Gene Ontology Consortium, and Human Gene Project and can be extended to new data sources via user defined parsers. AnnBuilder differs from other existing systems in that it provides users with unlimited ability to assemble data from user selected sources. The products of AnnBuilder are files in XML format that can be easily used by different systems.

引用

页码：155 / 156

页数：2

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