Phylogenetic analysis of the 16S-23S rRNA intergenic spacer regions of the genus Ureaplasma

被引:12
作者
Harasawa, R [1 ]
Lefkowitz, EJ [1 ]
Glass, JI [1 ]
Cassell, GH [1 ]
机构
[1] UNIV ALABAMA,DEPT MICROBIOL,BIRMINGHAM,AL 35294
关键词
phylogeny; rRNA; spacer; Ureaplasma; POLYMERASE CHAIN-REACTION; SP-NOV; DEOXYRIBONUCLEIC-ACID; UREALYTICUM; MYCOPLASMAS; SEROVARS; SEQUENCE; STRAINS;
D O I
10.1292/jvms.58.191
中图分类号
S85 [动物医学(兽医学)];
学科分类号
0906 ;
摘要
The nucleotide sequences of the spacer regions between the 16S and 23S rRNA genes of six Ureaplasma species were determined following amplification by polymerase chain reaction. The hypothetical secondary structure of the spacer regions was divided into four domains. Domains I and III were highly conserved among different Ureaplasma species but domains II and IV were variable. The intergenic spacer regions of ureaplasmas lacked spacer tRNA genes. Phylogenetic relationships among the Ureaplasma species indicated that the evolutionary history of the Ureaplasma species follows that of the host animal species, suggesting coevolution between ureaplasmas and animals.
引用
收藏
页码:191 / 195
页数:5
相关论文
共 29 条
[21]   COMPARISON OF 16S RIBOSOMAL-RNA GENES WITHIN THE T960 AND PARVO BIOVARS OF UREAPLASMAS ISOLATED FROM HUMANS [J].
ROBERTSON, JA ;
HOWARD, LA ;
ZINNER, CL ;
STEMKE, GW .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1994, 44 (04) :836-838
[22]   THE NEIGHBOR-JOINING METHOD - A NEW METHOD FOR RECONSTRUCTING PHYLOGENETIC TREES [J].
SAITOU, N ;
NEI, M .
MOLECULAR BIOLOGY AND EVOLUTION, 1987, 4 (04) :406-425
[23]   DNA SEQUENCING WITH CHAIN-TERMINATING INHIBITORS [J].
SANGER, F ;
NICKLEN, S ;
COULSON, AR .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1977, 74 (12) :5463-5467
[24]   UREAPLASMA-UREALYTICUM GEN-NOV, SP-NOV - PROPOSED NOMENCLATURE FOR HUMAN-T (T-STRAIN) MYCOPLASMAS [J].
SHEPARD, MC ;
LUNCEFORD, CD ;
FORD, DK ;
PURCELL, RH ;
TAYLORRO.D ;
RAZIN, S ;
BLACK, FT .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1974, 24 (02) :160-171
[25]  
SMART C, 1994, IOM LETT, V3, P269
[26]   SPECIFIC PROTEIN DIFFERENCES AMONG STRAINS OF UREAPLASMA-UREALYTICUM AS DETERMINED BY TWO-DIMENSIONAL GEL-ELECTROPHORESIS AND A SENSITIVE SILVER STAIN [J].
SWENSON, CE ;
VANHAMONT, J ;
DUNBAR, BS .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1983, 33 (02) :417-421
[27]   AMPLIFICATION OF THE 16S-23S SPACER REGION IN RIBOSOMAL-RNA OPERONS OF MYCOPLASMAS BY THE POLYMERASE CHAIN-REACTION [J].
UEMORI, T ;
ASADA, K ;
KATO, I ;
HARASAWA, R .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 1992, 15 (02) :181-186
[28]   A PHYLOGENETIC ANALYSIS OF THE MYCOPLASMAS - BASIS FOR THEIR CLASSIFICATION [J].
WEISBURG, WG ;
TULLY, JG ;
ROSE, DL ;
PETZEL, JP ;
OYAIZU, H ;
YANG, D ;
MANDELCO, L ;
SECHREST, J ;
LAWRENCE, TG ;
VANETTEN, J ;
MANILOFF, J ;
WOESE, CR .
JOURNAL OF BACTERIOLOGY, 1989, 171 (12) :6455-6467
[29]   OPTIMAL COMPUTER FOLDING OF LARGE RNA SEQUENCES USING THERMODYNAMICS AND AUXILIARY INFORMATION [J].
ZUKER, M ;
STIEGLER, P .
NUCLEIC ACIDS RESEARCH, 1981, 9 (01) :133-148